RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 TLX1P31314 330 aaPredicted RBP4.09□□□□□ -1.76
USH2A-201ENST00000307340 ZMYND11Q15326 602 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 LONRF1Q17RB8 773 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 COQ5Q5HYK3 327 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 ANKRD40Q6AI12 368 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 SNRNP48Q6IEG0 339 aaKnown RBP4.09□□□□□ -1.76
USH2A-201ENST00000307340 TESMINQ9Y4I5 508 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 SOBPA7XYQ1 873 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 UBXN8O00124 270 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 ENC1O14682 589 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 TEX28O15482 410 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 C2orf54Q08AI8 447 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 FBXO47Q5MNV8 452 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 DCLRE1AQ6PJP8 1040 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 DSTYKQ6XUX3 929 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 POF1BQ8WVV4 589 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 CALML5Q9NZT1 146 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 CAPN6Q9Y6Q1 641 aa4.09□□□□□ -1.76
USH2A-201ENST00000307340 GUCA1CO95843 209 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 HLA-DPA1P20036 260 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 FAM91A1Q658Y4 838 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MAP4K3Q8IVH8 894 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TCEANC2Q96MN5 208 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CORO1BQ9BR76 489 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 AKAP10O43572 662 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 THP07101 528 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 COL6A1P12109 1028 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 STOMP27105 288 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 GYG1P46976 350 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 VPS26BQ4G0F5 336 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ADCY4Q8NFM4 1077 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MPP4Q96JB8 637 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MMP19Q99542 508 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TMEM121Q9BTD3 319 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ACSS3Q9H6R3 686 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 LATS2Q9NRM7 1088 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CACFD1Q9UGQ2 172 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PRELID1Q9Y255 219 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SCTRP47872 440 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 DMC1Q14565 340 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SYT16Q17RD7 645 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ADCK1Q86TW2 530 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 LRMDAQ9H2I8 198 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 RAPGEFL1Q9UHV5 662 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CACNA1SQ13698 1873 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SLC22A1O15245 554 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SRP72O76094 671 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 KCNH1O95259 989 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 FGF1P05230 155 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SAT1P21673 171 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 YBEYP58557 167 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 CDKL4Q5MAI5 379 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PHF13Q86YI8 300 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 RTKNQ9BST9 563 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 GULP1Q9UBP9 304 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 FAM189A1O60320 539 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PDGFRAP16234 1089 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ZNF143P52747 638 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 SULT1C3Q6IMI6 304 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 OR52L1Q8NGH7 329 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 INTS2Q9H0H0 1204 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 CLK4Q9HAZ1 481 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 SUFUQ9UMX1 484 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PCDHGB5Q9Y5G0 923 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 HEBP2Q9Y5Z4 205 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MGRN1O60291 552 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 BCL10O95999 233 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 OR56A5P0C7T3 313 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 NMT1P30419 496 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 CCNG1P51959 295 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TRIM25Q14258 630 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 ERAP2Q6P179 960 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 KRT78Q8N1N4 520 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TMEM176AQ96HP8 235 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 MMTAG2Q9BU76 263 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 GTSE1Q9NYZ3 720 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 RPS6KL1Q9Y6S9 549 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 KPNA3O00505 521 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 B4GALT4O60513 344 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ATG7O95352 703 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SPOUT1Q5T280 376 aaKnown RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 PDZK1Q5T2W1 519 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ZFAND2BQ8WV99 257 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 SLC5A5Q92911 643 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ACTR6Q9GZN1 396 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 COPS7BQ9H9Q2 264 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 POPDC2Q9HBU9 364 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ZNF70Q9UC06 446 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 ATRNL1Q5VV63 1379 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PPP1R3GB7ZBB8 358 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 FAM47E-STBD1D6RA91 191 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 STX16-NPEPL1H3BU86 382 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ACKR2O00590 384 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 PER2O15055 1255 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 UBTFL6P0CB48 400 aaPredicted RBP4.08□□□□□ -1.76
USH2A-201ENST00000307340 SCIMPQ6UWF3 145 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 ATG9AQ7Z3C6 839 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CYGBQ8WWM9 190 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 CSPG4P5Q96PW8 444 aa4.08□□□□□ -1.76
USH2A-201ENST00000307340 TRMT6Q9UJA5 497 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms