RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 HIBCHQ6NVY1 386 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 CLIP3Q96DZ5 547 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 ZMYM5Q9UJ78 669 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 GNPTGQ9UJJ9 305 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 A0A088AWK7 358 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 SH3BGRLO75368 114 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 VAPBO95292 243 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 ZNF10P21506 573 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 NT5DC1Q5TFE4 455 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 C16orf89Q6UX73 402 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 IFNLR1Q8IU57 520 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 OR9Q1Q8NGQ5 310 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 KAT5Q92993 513 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 ISCUQ9H1K1 167 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 POLMQ9NP87 494 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 SH3BP4Q9P0V3 963 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 DNPEPQ9ULA0 475 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 INPP4BO15327 924 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 SNHG28P0DPA3 235 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 EEF1DP29692 281 aaKnown RBP10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 VSNL1P62760 191 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 ACTN3Q08043 901 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 ZNF470Q6ECI4 717 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 NPNTQ6UXI9 565 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 LRP10Q7Z4F1 713 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 FAM111AQ96PZ2 611 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 BBS4Q96RK4 519 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 PRKD2Q9BZL6 878 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 CNGB3Q9NQW8 809 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC5A3P53794 718 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 GALNT3Q14435 633 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 AUTS2Q8WXX7 1259 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 DUSP9Q99956 384 aaKnown RBP10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 MDM4O15151 490 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 USP12O75317 370 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 FGRP09769 529 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 PBX3P40426 434 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 GRB14Q14449 540 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC51AQ86UW1 340 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 KRT78Q8N1N4 520 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 REPS1Q96D71 796 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 PAGE1O75459 146 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 DNAJC8O75937 253 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 RASGRP1O95267 797 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 RFC2P35250 354 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 PEX5P50542 639 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 HSP90AA5PQ58FG0 334 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 SETD3Q86TU7 594 aaPredicted RBP10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 STK40Q8N2I9 435 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 KCNF1Q9H3M0 494 aa10.89□□□□□ -0.67
SYNPO2-201ENST00000307142 ZSCAN5CA6NGD5 496 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 IFNA16P05015 189 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 NRIP1P48552 1158 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ZNF143P52747 638 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 FIGNQ5HY92 759 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 RASIP1Q5U651 963 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ZNF555Q8NEP9 628 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 MYCBPAPQ8TBZ2 947 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 B3GALT6Q96L58 329 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ROPN1BQ9BZX4 212 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ROPN1Q9HAT0 212 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ACP6Q9NPH0 428 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 BTN3A1O00481 513 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 KDELR1P24390 212 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 GCKP35557 465 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 SKOR1P84550 965 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ARHGAP20Q9P2F6 1191 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ACOT9Q9Y305 439 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 PSMB4P28070 264 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 RPA3P35244 121 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 MAXP61244 160 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 CYP4F8P98187 520 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 MAP3K10Q02779 954 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 HSPA14Q0VDF9 509 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 INTS6LQ5JSJ4 861 aaKnown RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 GRTP1Q5TC63 336 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 FBXW10Q5XX13 1052 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 SLC22A9Q8IVM8 553 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 SUGP1Q8IWZ8 645 aaKnown RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 CLEC4FQ8N1N0 589 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 TRIML2Q8N7C3 387 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ARL14EPQ8N8R7 260 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 NDRG1Q92597 394 aaKnown RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 RBBP8Q99708 897 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ARL15Q9NXU5 204 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 AGO1Q9UL18 857 aaKnown RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 UBR2Q8IWV8 1755 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 PLCH1Q4KWH8 1693 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 CRYBG1Q9Y4K1 1723 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 KLRG2A4D1S0 409 aaPredicted RBP10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 C1RP00736 705 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 MPOP05164 745 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 GNSP15586 552 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 GUCY1A3Q02108 690 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 SH3D19Q5HYK7 790 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 ECHDC2Q86YB7 292 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 TLR9Q9NR96 1032 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 AKAP10O43572 662 aa10.88□□□□□ -0.67
SYNPO2-201ENST00000307142 BUD23O43709 281 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms