RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 TULP2O00295 520 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 IKBKBO14920 756 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 LUC7L3O95232 432 aaKnown RBP12.21□□□□□ -0.45
SMIM4-201ENST00000307106 ADIGQ0VDE8 80 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 CNTN1Q12860 1018 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 TGIF1Q15583 401 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 E2F4Q16254 413 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 ZNF542PQ5EBM4 170 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 FAM46CQ5VWP2 391 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 NADSYN1Q6IA69 706 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 CNNM4Q6P4Q7 775 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 UNC13DQ70J99 1090 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 DSG4Q86SJ6 1040 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 APCDD1Q8J025 514 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 SLC22A18ASQ8N1D0 253 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 CFAP52Q8N1V2 620 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 ANKRD52Q8NB46 1076 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 TPCN2Q8NHX9 752 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 TMC2Q8TDI7 906 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 IFT43Q96FT9 208 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 IPO9Q96P70 1041 aaKnown RBP12.21□□□□□ -0.45
SMIM4-201ENST00000307106 CUEDC2Q9H467 287 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 PREBQ9HCU5 417 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 FZD3Q9NPG1 666 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 DMAC2Q9NW81 257 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 DNAJC28Q9NX36 388 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 SARDHQ9UL12 918 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 PAXBP1Q9Y5B6 917 aa12.21□□□□□ -0.45
SMIM4-201ENST00000307106 SPTBN1Q01082 2364 aaKnown RBP12.21□□□□□ -0.46
SMIM4-201ENST00000307106 CHD5Q8TDI0 1954 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 EME2A4GXA9 379 aaPredicted RBP12.2□□□□□ -0.46
SMIM4-201ENST00000307106 VPS37CA5D8V6 355 aaPredicted RBP12.2□□□□□ -0.46
SMIM4-201ENST00000307106 XPO1O14980 1071 aaKnown RBP12.2□□□□□ -0.46
SMIM4-201ENST00000307106 NOBOXO60393 691 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 HNRNPA2B1P22626 353 aaKnown RBP12.2□□□□□ -0.46
SMIM4-201ENST00000307106 SLC5A2P31639 672 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 AKT2P31751 481 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 AFMP43652 599 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 NUMBP49757 651 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 PDX1P52945 283 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 HNRNPKP61978 463 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMIM4-201ENST00000307106 C1orf220Q5T0J3 134 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 ARHGAP17Q68EM7 881 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 MSANTD2Q6P1R3 559 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 FAM173BQ6P4H8 233 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 C14orf80Q86SX3 495 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 SLC4A11Q8NBS3 891 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 ZNF548Q8NEK5 533 aaPredicted RBP12.2□□□□□ -0.46
SMIM4-201ENST00000307106 TAS1R2Q8TE23 839 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 OR8D1Q8WZ84 308 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 TATDN2Q93075 761 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 AZIN2Q96A70 460 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 DHX58Q96C10 678 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 NOX5Q96PH1 765 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 C7orf25Q9BPX7 421 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 DDX50Q9BQ39 737 aaKnown RBP12.2□□□□□ -0.46
SMIM4-201ENST00000307106 SLC25A18Q9H1K4 315 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 NCKIPSDQ9NZQ3 722 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 MAN2B2Q9Y2E5 1009 aa12.2□□□□□ -0.46
SMIM4-201ENST00000307106 UTP20O75691 2785 aaKnown RBP12.2□□□□□ -0.46
SMIM4-201ENST00000307106 SDK2Q58EX2 2172 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 CREBBPQ92793 2442 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 A0A1W2PQU0 124 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 CLEC18AA5D8T8 446 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 C1QTNF3-AMACRE9PGA6 284 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 RIOK3O14730 519 aaKnown RBP12.19□□□□□ -0.46
SMIM4-201ENST00000307106 CASC3O15234 703 aaKnown RBP12.19□□□□□ -0.46
SMIM4-201ENST00000307106 CASP1P29466 404 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 RAD23BP54727 409 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 TBX4P57082 545 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 CLDN2P57739 230 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 TAS2R38P59533 333 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 DRAP1Q14919 205 aaPredicted RBP12.19□□□□□ -0.46
SMIM4-201ENST00000307106 TBR1Q16650 682 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 GOLGA7BQ2TAP0 167 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 MS4A13Q5J8X5 152 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 PERM1Q5SV97 790 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 CLEC18BQ6UXF7 455 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 GCNT7Q6ZNI0 430 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 JAMLQ86YT9 394 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 SLC9A9Q8IVB4 645 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 SIX6OS1Q8N1H7 587 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 CLEC18CQ8NCF0 446 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 CCDC150Q8NCX0 1101 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 FRS2Q8WU20 508 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 NUCKS1Q9H1E3 243 aaKnown RBP12.19□□□□□ -0.46
SMIM4-201ENST00000307106 EPN3Q9H201 632 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.19□□□□□ -0.46
SMIM4-201ENST00000307106 PCDHGA7Q9Y5G6 932 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 LRP4O75096 1905 aa12.19□□□□□ -0.46
SMIM4-201ENST00000307106 H3BM21 787 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 PLD2O14939 933 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 LIPCP11150 499 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 GCLMP48507 274 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 DAOAP59103 153 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 SPIDRQ14159 915 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 NR0B2Q15466 257 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 ZNF284Q2VY69 593 aa12.18□□□□□ -0.46
SMIM4-201ENST00000307106 DCAF6Q58WW2 860 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms