RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 DEFB128Q7Z7B8 93 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.69□□□□□ -1.34
USP47-201ENST00000305481 RTL3Q8N8U3 475 aaKnown RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 ANKLE1Q8NAG6 615 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 SPATA22Q8NHS9 363 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 RMDN2Q96LZ7 410 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 SRPK1Q96SB4 655 aaKnown RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 IL12RB2Q99665 862 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 TMEM175Q9BSA9 504 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 PPP1R12CQ9BZL4 782 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 VANGL2Q9ULK5 521 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 ZCWPW2A0A1B0GU75 182 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CNTN5O94779 1100 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 FSBPO95073 299 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 TOP3BO95985 862 aaKnown RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 ERVK-10P10266 1014 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 TPH1P17752 444 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CCNFP41002 786 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 TBX4P57082 545 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 ACTN3Q08043 901 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 PSMD5Q16401 504 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 MGAT5BQ3V5L5 792 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 SLC39A5Q6ZMH5 540 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 TMEM135Q86UB9 458 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CCNJLQ8IV13 435 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CCDC63Q8NA47 563 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 FBXO32Q969P5 355 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 MYEOVQ96EZ4 313 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 THOC1Q96FV9 657 aaKnown RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 SPATA17Q96L03 361 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 SEPT5Q99719 369 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 TTPALQ9BTX7 342 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 RNF208Q9H0X6 261 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 VPS11Q9H270 941 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 CATSPERBQ9H7T0 1116 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 PRDM5Q9NQX1 630 aaPredicted RBP6.69□□□□□ -1.34
USP47-201ENST00000305481 CLIC5Q9NZA1 410 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 STARD13Q9Y3M8 1113 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 RPS6KL1Q9Y6S9 549 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 COL4A6Q14031 1691 aa6.69□□□□□ -1.34
USP47-201ENST00000305481 TANC1Q9C0D5 1861 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ERI2A8K979 691 aaKnown RBP6.68□□□□□ -1.34
USP47-201ENST00000305481 WASH4PA8MWX3 477 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 MATN3O15232 486 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 KRT38O76015 456 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 PEX11BO96011 259 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 MT-CYBP00156 380 aaPredicted RBP6.68□□□□□ -1.34
USP47-201ENST00000305481 ALDOAP04075 364 aaKnown RBP6.68□□□□□ -1.34
USP47-201ENST00000305481 F7P08709 466 aaPredicted RBP6.68□□□□□ -1.34
USP47-201ENST00000305481 ALADP13716 330 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 RPL17P18621 184 aaKnown RBP6.68□□□□□ -1.34
USP47-201ENST00000305481 PAPOLAP51003 745 aaKnown RBP6.68□□□□□ -1.34
USP47-201ENST00000305481 COG7P83436 770 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 TLE2Q04725 743 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ALFQ53S48 1182 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ITPRIPL1Q6GPH6 555 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 PACS1Q6VY07 963 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 TIFABQ6ZNK6 161 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 OTOAQ7RTW8 1153 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 MIB1Q86YT6 1006 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ARHGAP18Q8N392 663 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ATPAF2Q8N5M1 289 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 LZTR1Q8N653 840 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 SPPL2BQ8TCT7 592 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 LRRC8CQ8TDW0 803 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 GIPC2Q8TF65 315 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 NAT9Q9BTE0 207 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 SLC13A1Q9BZW2 595 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 CCSER2Q9H7U1 834 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ARL2BPQ9Y2Y0 163 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 PLLPQ9Y342 182 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 SH3BP1Q9Y3L3 701 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 CDY1Q9Y6F8 540 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 IGLV3-10A0A075B6K4 115 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 HOXA2O43364 376 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 UPP2O95045 317 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 IGLV3-27P01718 113 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 POLBP06746 335 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ZDHHC11BP0C7U3 371 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 SCTRP47872 440 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 TRIM60Q495X7 471 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 LGSNQ5TDP6 509 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 CES4AQ5XG92 561 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 DENND5AQ6IQ26 1287 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ANKS3Q6ZW76 656 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 TFAP2DQ7Z6R9 452 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 FITM2Q8N6M3 262 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 IGSF8Q969P0 613 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 GRAMD1AQ96CP6 724 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 MTBPQ96DY7 904 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 MFSD3Q96ES6 412 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ZNF778Q96MU6 729 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 MRPL9Q9BYD2 267 aaKnown RBP6.68□□□□□ -1.34
USP47-201ENST00000305481 CWH43Q9H720 699 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 MANSC1Q9H8J5 431 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 CHRAC1Q9NRG0 131 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 MKS1Q9NXB0 559 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 ZNF212Q9UDV6 495 aa6.68□□□□□ -1.34
USP47-201ENST00000305481 MAGED2Q9UNF1 606 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms