RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 SNX9Q9Y5X1 595 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 SNX5Q9Y5X3 404 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 DDHD2O94830 711 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 SUPT20HL2P0C7V6 817 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 TFEBP19484 476 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 PSMB4P28070 264 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 MAGEA10P43363 369 aaPredicted RBP13.28□□□□□ -0.28
TRIM35-201ENST00000305364 BFSP2Q13515 415 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 GRM2Q14416 872 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 XKR5Q6UX68 686 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 OR52K1Q8NGK4 314 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 OMDQ99983 421 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF696Q9H7X3 374 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF70Q9UC06 446 aaPredicted RBP13.28□□□□□ -0.28
TRIM35-201ENST00000305364 SEPT3Q9UH03 358 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.28□□□□□ -0.28
TRIM35-201ENST00000305364 KCNU1A8MYU2 1149 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 MATN2O00339 956 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 MPOP05164 745 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 C2P06681 752 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 CRY2Q49AN0 593 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ARL13AQ5H913 290 aaPredicted RBP13.28□□□□□ -0.28
TRIM35-201ENST00000305364 PERM1Q5SV97 790 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 EGFLAMQ63HQ2 1017 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 NCCRP1Q6ZVX7 275 aaPredicted RBP13.28□□□□□ -0.28
TRIM35-201ENST00000305364 EXOC8Q8IYI6 725 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 METTL25Q8N6Q8 603 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ZC3H15Q8WU90 426 aaKnown RBP13.28□□□□□ -0.28
TRIM35-201ENST00000305364 MOCOSQ96EN8 888 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 OXCT2Q9BYC2 517 aaPredicted RBP13.28□□□□□ -0.28
TRIM35-201ENST00000305364 SPC25Q9HBM1 224 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 UBP1Q9NZI7 540 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 VTI1BQ9UEU0 232 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 VANGL2Q9ULK5 521 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 TRIM17Q9Y577 477 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ZNF23P17027 643 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ACOT1Q86TX2 421 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 DDIASQ8IXT1 998 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ARL10Q8N8L6 244 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ELMO2Q96JJ3 720 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 APBA2Q99767 749 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 PORCNQ9H237 461 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 CHST12Q9NRB3 414 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 NCKIPSDQ9NZQ3 722 aa13.28□□□□□ -0.28
TRIM35-201ENST00000305364 ALBP02768 609 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 FASP25445 335 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 HOXA10P31260 410 aaPredicted RBP13.27□□□□□ -0.28
TRIM35-201ENST00000305364 SLC12A1Q13621 1099 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 INSCQ1MX18 579 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 CAMK1DQ8IU85 385 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 CLEC4FQ8N1N0 589 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 SLC4A11Q8NBS3 891 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 GABPB2Q8TAK5 448 aaPredicted RBP13.27□□□□□ -0.28
TRIM35-201ENST00000305364 SIGLEC10Q96LC7 697 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 PCDHGC3Q9UN70 934 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 ATP11BQ9Y2G3 1177 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 ACOT9Q9Y305 439 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 RBMX2Q9Y388 322 aaKnown RBP13.27□□□□□ -0.28
TRIM35-201ENST00000305364 PSAT1Q9Y617 370 aa13.27□□□□□ -0.28
TRIM35-201ENST00000305364 NFASCO94856 1347 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 A0A0A0MRY4 1105 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 FAM149AA5PLN7 773 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 DPYSQ14117 519 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 OTUD3Q5T2D3 398 aaPredicted RBP13.27□□□□□ -0.29
TRIM35-201ENST00000305364 PCDH19Q8TAB3 1148 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 SPATA13Q96N96 652 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 TBCBQ99426 244 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 GPATCH1Q9BRR8 931 aaKnown RBP13.27□□□□□ -0.29
TRIM35-201ENST00000305364 VPS45Q9NRW7 570 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 AKT3Q9Y243 479 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 TMEM114B3SHH9 223 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 ALDOAP04075 364 aaKnown RBP13.27□□□□□ -0.29
TRIM35-201ENST00000305364 SMIM18P0DKX4 95 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 ADORA2AP29274 412 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 NDST1P52848 882 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 CDKL1Q00532 357 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 ANO4Q32M45 955 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 OLFML1Q6UWY5 402 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 C15orf39Q6ZRI6 1047 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 KIAA0319LQ8IZA0 1049 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 SPATA6LQ8N4H0 392 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 WDTC1Q8N5D0 677 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 USP33Q8TEY7 942 aa13.27□□□□□ -0.29
TRIM35-201ENST00000305364 TOGARAM1Q9Y4F4 1720 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 BCLAF3A2AJT9 711 aaKnown RBP13.26□□□□□ -0.29
TRIM35-201ENST00000305364 SYCE1LA8MT33 242 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 TK2O00142 265 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 SULT1E1P49888 294 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 KCTD2Q14681 263 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 SAMD4BQ5PRF9 694 aaKnown RBP13.26□□□□□ -0.29
TRIM35-201ENST00000305364 PGM2L1Q6PCE3 622 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 KCNMB4Q86W47 210 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 DHRSXQ8N5I4 330 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 RIN3Q8TB24 985 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 MED10Q9BTT4 135 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 LRRC4Q9HBW1 653 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 EML4Q9HC35 981 aaKnown RBP13.26□□□□□ -0.29
TRIM35-201ENST00000305364 SH3PXD2BA1X283 911 aa13.26□□□□□ -0.29
TRIM35-201ENST00000305364 J3QRK9 145 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms