RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 TIE1P35590 1138 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 KIR2DL1P43626 348 aaPredicted RBP25.09■■□□□ 1.61
HOXC9-201ENST00000303450 PEX5P50542 639 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 E2F5Q15329 346 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 EMC10Q5UCC4 262 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 MFSD7Q6UXD7 560 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 LZTR1Q8N653 840 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 ZNF513Q8N8E2 541 aaPredicted RBP25.09■■□□□ 1.61
HOXC9-201ENST00000303450 SORCS1Q8WY21 1168 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 TTC17Q96AE7 1141 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 ALG14Q96F25 216 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 HES6Q96HZ4 224 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 RNF157Q96PX1 679 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 ETNK2Q9NVF9 386 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 PLA2G4CQ9UP65 541 aa25.09■■□□□ 1.61
HOXC9-201ENST00000303450 NUP205Q92621 2012 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 PI15O43692 258 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 KIF5CO60282 957 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 RPS9P46781 194 aaKnown RBP25.08■■□□□ 1.61
HOXC9-201ENST00000303450 DNA2P51530 1060 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 NDST2P52849 883 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 YBEYP58557 167 aaPredicted RBP25.08■■□□□ 1.61
HOXC9-201ENST00000303450 MRPS21P82921 87 aaKnown RBP25.08■■□□□ 1.61
HOXC9-201ENST00000303450 SULT2A1Q06520 285 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 IL31Q6EBC2 164 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 FBXL6Q8N531 539 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 KCNV2Q8TDN2 545 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.08■■□□□ 1.61
HOXC9-201ENST00000303450 ARHGEF2Q92974 986 aaKnown RBP25.08■■□□□ 1.61
HOXC9-201ENST00000303450 C2orf49Q9BVC5 232 aaPredicted RBP25.08■■□□□ 1.61
HOXC9-201ENST00000303450 ATP13A1Q9HD20 1204 aa25.08■■□□□ 1.61
HOXC9-201ENST00000303450 ANTXRLA6NF34 631 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 ASLP04424 464 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 DLDP09622 509 aaKnown RBP25.07■■□□□ 1.6
HOXC9-201ENST00000303450 SERPINB6P35237 376 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 PARP15Q460N3 678 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 MEI1Q5TIA1 1274 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 EGFLAMQ63HQ2 1017 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 SPOCD1Q6ZMY3 1216 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 Q6ZS52 159 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 ZNF354CQ86Y25 554 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 RPLP0P6Q8NHW5 317 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 USP33Q8TEY7 942 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 CYB5D2Q8WUJ1 264 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 ALG3Q92685 438 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 CELF6Q96J87 481 aaKnown RBP25.07■■□□□ 1.6
HOXC9-201ENST00000303450 NOL6Q9H6R4 1146 aaKnown RBP25.07■■□□□ 1.6
HOXC9-201ENST00000303450 MFHAS1Q9Y4C4 1052 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 RASA4BC9J798 803 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 RASA4O43374 803 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 ACVRL1P37023 503 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 CETN2P41208 172 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 CDKN2BP42772 138 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 MAGEA9P43362 315 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 ECT2LQ008S8 904 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 RPS6KA1Q15418 735 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 HS1BP3Q53T59 392 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 TFDP3Q5H9I0 405 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 RFX6Q8HWS3 928 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 NPWQ8N729 165 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 DCAF4L2Q8NA75 395 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 KLC2Q9H0B6 622 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 LRRC19Q9H756 370 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 ZDHHC4Q9NPG8 344 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 HPCAL4Q9UM19 191 aa25.07■■□□□ 1.6
HOXC9-201ENST00000303450 ZDBF2Q9HCK1 2354 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 CHD5Q8TDI0 1954 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 CBX4O00257 560 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 DLL1O00548 723 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 DDX3YO15523 660 aaKnown RBP25.06■■□□□ 1.6
HOXC9-201ENST00000303450 MSNP26038 577 aaKnown RBP25.06■■□□□ 1.6
HOXC9-201ENST00000303450 CTSOP43234 321 aaPredicted RBP25.06■■□□□ 1.6
HOXC9-201ENST00000303450 ZNF569Q5MCW4 686 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 TRMT11Q7Z4G4 463 aaKnown RBP25.06■■□□□ 1.6
HOXC9-201ENST00000303450 CHPFQ8IZ52 775 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 PQLC3Q8N755 202 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 ACDQ96AP0 544 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 HMCESQ96FZ2 354 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 PSMB7Q99436 277 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 C1QTNF1Q9BXJ1 281 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 CHRDQ9H2X0 955 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 PRDM16Q9HAZ2 1276 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 C11orf16Q9NQ32 467 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 THAP10Q9P2Z0 257 aaPredicted RBP25.06■■□□□ 1.6
HOXC9-201ENST00000303450 HCN2Q9UL51 889 aa25.06■■□□□ 1.6
HOXC9-201ENST00000303450 ARHGAP42A6NI28 874 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 NPC1O15118 1278 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 SNAP91O60641 907 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 GPR37L1O60883 481 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 HNRNPLP14866 589 aaKnown RBP eCLIP25.05■■□□□ 1.6
HOXC9-201ENST00000303450 COPS2P61201 443 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 LLGL1Q15334 1064 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 TAZQ16635 292 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 KAZNQ674X7 775 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 NCBP2-AS2Q69YL0 99 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 ALLCQ8N6M5 410 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 ACE2Q9BYF1 805 aaPredicted RBP25.05■■□□□ 1.6
HOXC9-201ENST00000303450 SLC39A8Q9C0K1 460 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 VPS51Q9UID3 782 aa25.05■■□□□ 1.6
HOXC9-201ENST00000303450 SLC25A13Q9UJS0 675 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms