RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 SMNDC1O75940 238 aaKnown RBP eCLIP16.63■□□□□ 0.25
BRD3-201ENST00000303407 ZNF682O95780 498 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 ALOX15P16050 662 aaPredicted RBP16.63■□□□□ 0.25
BRD3-201ENST00000303407 CACNA2D1P54289 1103 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 CXCL17Q6UXB2 119 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 YIPF2Q9BWQ6 316 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 R3HDM2Q9Y2K5 976 aaKnown RBP16.63■□□□□ 0.25
BRD3-201ENST00000303407 CCDC154A6NI56 674 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 PSMG1O95456 288 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 MRPS5P82675 430 aaKnown RBP16.63■□□□□ 0.25
BRD3-201ENST00000303407 PTPN20Q4JDL3 420 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 PALB2Q86YC2 1186 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 RNF148Q8N7C7 305 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 PLEKHA8Q96JA3 519 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 CDRT15Q96T59 188 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 EBNA1BP2Q99848 306 aaKnown RBP16.63■□□□□ 0.25
BRD3-201ENST00000303407 SH3GL1Q99961 368 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 ATP11BQ9Y2G3 1177 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 A0A1W2PPM1 405 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 CCNB1P14635 433 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 PLD1Q13393 1074 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 CAMK2GQ13555 558 aaPredicted RBP16.63■□□□□ 0.25
BRD3-201ENST00000303407 C9orf57Q5W0N0 161 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 RETSATQ6NUM9 610 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 MRPL9Q9BYD2 267 aaKnown RBP16.63■□□□□ 0.25
BRD3-201ENST00000303407 MARCH2Q9P0N8 246 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 LZTS1Q9Y250 596 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 CLK1P49759 484 aaKnown RBP16.63■□□□□ 0.25
BRD3-201ENST00000303407 NEK2P51955 445 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 FBXO6Q9NRD1 293 aaPredicted RBP16.63■□□□□ 0.25
BRD3-201ENST00000303407 COMMD8Q9NX08 183 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 CCDC167Q9P0B6 97 aa16.63■□□□□ 0.25
BRD3-201ENST00000303407 ABCC6O95255 1503 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 F8W810 466 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 B4GALT4O60513 344 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 ZNF7P17097 686 aaPredicted RBP16.62■□□□□ 0.25
BRD3-201ENST00000303407 MATKP42679 507 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 CRYBB1P53674 252 aaPredicted RBP16.62■□□□□ 0.25
BRD3-201ENST00000303407 CNTN1Q12860 1018 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 RAP1GAP2Q684P5 730 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 C11orf74Q86VG3 221 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 IQCKQ8N0W5 287 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 TUBGCP4Q9UGJ1 667 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 VPS4BO75351 444 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 MMP8P22894 467 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 ARL2P36404 184 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 TRPC1P48995 793 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 NEPROQ6NW34 567 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 PIWIL2Q8TC59 973 aaKnown RBP16.62■□□□□ 0.25
BRD3-201ENST00000303407 DPY30Q9C005 99 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 RNPEPQ9H4A4 650 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 DERAQ9Y315 318 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 CLUHO75153 1309 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 COL1A2P08123 1366 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 TCRBV9S1A1TA0A576 114 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 MGAT4DA6NG13 374 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 CLPTM1O96005 669 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 CCDC15Q0P6D6 951 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 QPCTQ16769 361 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 LRRC52Q8N7C0 313 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 FIG4Q92562 907 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 MARK4Q96L34 752 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 SH3GL2Q99962 352 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 ST6GALNAC4Q9H4F1 302 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 PRDM12Q9H4Q4 367 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 PCDH18Q9HCL0 1135 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 NDUFA13Q9P0J0 144 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 PCDHB12Q9Y5F1 795 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 GNG14A0A1W2PPG7 69 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 MLNP12872 115 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 WEE1P30291 646 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 HSDL1Q3SXM5 330 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 FAM120BQ96EK7 910 aaKnown RBP16.62■□□□□ 0.25
BRD3-201ENST00000303407 DUSP16Q9BY84 665 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 NIFKQ9BYG3 293 aaKnown RBP16.62■□□□□ 0.25
BRD3-201ENST00000303407 H2AFY2Q9P0M6 372 aaPredicted RBP16.62■□□□□ 0.25
BRD3-201ENST00000303407 ARHGAP28Q9P2N2 729 aa16.62■□□□□ 0.25
BRD3-201ENST00000303407 PRR23AA6NEV1 266 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 LTA4HP09960 611 aaKnown RBP16.61■□□□□ 0.25
BRD3-201ENST00000303407 MSH3P20585 1137 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 ANKS6Q68DC2 871 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 NXF3Q9H4D5 531 aaKnown RBP16.61■□□□□ 0.25
BRD3-201ENST00000303407 ALG9Q9H6U8 611 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 SEPT3Q9UH03 358 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 AP4S1Q9Y587 144 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 CST3P01034 146 aaPredicted RBP16.61■□□□□ 0.25
BRD3-201ENST00000303407 FAM58BPP0C7Q3 252 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 ME2P23368 584 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 FASP25445 335 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 PCYT1AP49585 367 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 KCNJ2P63252 427 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 TRAF2Q12933 501 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 CDC16Q13042 620 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 MAD2L1Q13257 205 aaPredicted RBP16.61■□□□□ 0.25
BRD3-201ENST00000303407 TOP6BLQ8N6T0 577 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 ZFYVE19Q96K21 471 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 CPXM1Q96SM3 734 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 SEPHS2Q99611 448 aa16.61■□□□□ 0.25
BRD3-201ENST00000303407 CIPCQ9C0C6 399 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms