RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 MRPL17Q9NRX2 175 aaKnown RBP22.78■■□□□ 1.24
SMAD1-201ENST00000302085 ZNF212Q9UDV6 495 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 DOCK4Q8N1I0 1966 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 ERI2A8K979 691 aaKnown RBP22.78■■□□□ 1.24
SMAD1-201ENST00000302085 ZBBXA8MT70 800 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 COCHO43405 550 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 USP12O75317 370 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 LINC00271P0C7V0 271 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 NDST2P52849 883 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 ANKRD42Q8N9B4 389 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 MGARPQ8TDB4 240 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 OXNAD1Q96HP4 312 aaPredicted RBP22.78■■□□□ 1.24
SMAD1-201ENST00000302085 TRPM5Q9NZQ8 1165 aa22.78■■□□□ 1.24
SMAD1-201ENST00000302085 IPO11Q9UI26 975 aaKnown RBP22.78■■□□□ 1.24
SMAD1-201ENST00000302085 NYNRINQ9P2P1 1898 aaKnown RBP22.77■■□□□ 1.24
SMAD1-201ENST00000302085 PRRG1O14668 218 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 TACR2P21452 398 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 PPM1AP35813 382 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 TWF1Q12792 350 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 LRRC14Q15048 493 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 ACBD5Q5T8D3 534 aaPredicted RBP22.77■■□□□ 1.24
SMAD1-201ENST00000302085 KLHDC10Q6PID8 442 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 KLHDC8BQ8IXV7 354 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 TCEAL8Q8IYN2 117 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 TRMT2BQ96GJ1 504 aaKnown RBP22.77■■□□□ 1.24
SMAD1-201ENST00000302085 CASS4Q9NQ75 786 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 SYBUQ9NX95 663 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 MOCS1Q9NZB8 636 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 UBP1Q9NZI7 540 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 SENP1Q9P0U3 644 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 PCDHB12Q9Y5F1 795 aa22.77■■□□□ 1.24
SMAD1-201ENST00000302085 TEX28O15482 410 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 SPAG7O75391 227 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 FGF18O76093 207 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 FGBP02675 491 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 PLD1Q13393 1074 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 TIGD7Q6NT04 549 aaPredicted RBP22.76■■□□□ 1.23
SMAD1-201ENST00000302085 CASC4Q6P4E1 433 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 DNAJB7Q7Z6W7 309 aaPredicted RBP22.76■■□□□ 1.23
SMAD1-201ENST00000302085 CHSY1Q86X52 802 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 PPM1NQ8N819 430 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 HMCESQ96FZ2 354 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 RPRD1AQ96P16 312 aaPredicted RBP22.76■■□□□ 1.23
SMAD1-201ENST00000302085 NACA2Q9H009 215 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 GLOD4Q9HC38 313 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 KIAA1671Q9BY89 1806 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 FAM159BA6NKW6 160 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 FAM155BO75949 473 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 PEX11BO96011 259 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 ELF1P32519 619 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 HTRA4P83105 476 aaPredicted RBP22.76■■□□□ 1.23
SMAD1-201ENST00000302085 MTA1Q13330 715 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 PRPSAP1Q14558 356 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 TAF12Q16514 161 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 CYS1Q717R9 158 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 SLC26A11Q86WA9 606 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 CIR1Q86X95 450 aaPredicted RBP22.76■■□□□ 1.23
SMAD1-201ENST00000302085 CTAGE3PQ8IX95 158 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 C4orf33Q8N1A6 199 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.76■■□□□ 1.23
SMAD1-201ENST00000302085 RNF38Q9H0F5 515 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 CCDC134Q9H6E4 229 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 RXFP1Q9HBX9 757 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 MLXIPLQ9NP71 852 aa22.76■■□□□ 1.23
SMAD1-201ENST00000302085 RBM22Q9NW64 420 aaKnown RBP eCLIP22.76■■□□□ 1.23
SMAD1-201ENST00000302085 NDUFAB1O14561 156 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 ACSL4O60488 711 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 ALDH1A2O94788 518 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 FAM107AO95990 144 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 INHBAP08476 426 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 UBE2Q1Q7Z7E8 422 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 LRRC6Q86X45 466 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 CCNJLQ8IV13 435 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 BADQ92934 168 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 FCRL5Q96RD9 977 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 SMC6Q96SB8 1091 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 IKBKGQ9Y6K9 419 aa22.75■■□□□ 1.23
SMAD1-201ENST00000302085 UGT1A9O60656 530 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 SPATA31D3P0C874 917 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 PGAM1P18669 254 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 SLC6A4P31645 630 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 IFNAR2P48551 515 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 VEPH1Q14D04 833 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 SPATA31D4Q6ZUB0 917 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 TMEM150AQ86TG1 271 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 GPR65Q8IYL9 337 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 UNC5BQ8IZJ1 945 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 LGI2Q8N0V4 545 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 FIBCD1Q8N539 461 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 SPATA22Q8NHS9 363 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 DENND1AQ8TEH3 1009 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 ZNF317Q96PQ6 595 aaPredicted RBP22.74■■□□□ 1.23
SMAD1-201ENST00000302085 APOL2Q9BQE5 337 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 ZBP1Q9H171 429 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 LRRC40Q9H9A6 602 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 UGT1A7Q9HAW7 530 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 UGT1A10Q9HAW8 530 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 UGT1A8Q9HAW9 530 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 GKN1Q9NS71 199 aa22.74■■□□□ 1.23
SMAD1-201ENST00000302085 DONSONQ9NYP3 566 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms