RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 KATNA1O75449 491 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 S100BP04271 92 aaPredicted RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 OR1G1P47890 313 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 PITX1P78337 314 aaPredicted RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 CDC16Q13042 620 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 ARL13AQ5H913 290 aaPredicted RBP13.55□□□□□ -0.24
CASC4-201ENST00000299957 EMC10Q5UCC4 262 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 SATL1Q86VE3 508 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 TP53INP2Q8IXH6 220 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 ANKRD13AQ8IZ07 590 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 THEM5Q8N1Q8 247 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 ZNF333Q96JL9 665 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 EXOC2Q96KP1 924 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 KLHL5Q96PQ7 755 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 GPR20Q99678 358 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 HAUS8Q9BT25 410 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 LATS2Q9NRM7 1088 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 BTRCQ9Y297 605 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 KIF13AQ9H1H9 1805 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 TMEM233B4DJY2 109 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 NDUFS3O75489 264 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 RHOBTB1O94844 696 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 CCDC166P0CW27 439 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 PCNAP12004 261 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 RTP1P59025 263 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 KLF10Q13118 480 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 IMPG1Q17R60 797 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 DCAF4L1Q3SXM0 396 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 ZNF618Q5T7W0 954 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 FAM117BQ6P1L5 589 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 CHSY1Q86X52 802 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 DENND6AQ8IWF6 608 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 DNAJB14Q8TBM8 379 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 CIB1Q99828 191 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 NAT9Q9BTE0 207 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 DTLQ9NZJ0 730 aa13.55□□□□□ -0.24
CASC4-201ENST00000299957 MSI1O43347 362 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 GAS2O43903 313 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 SLC25A27O95847 323 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 ATICP31939 592 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 ABL2P42684 1182 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 RPL14P50914 215 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 PTP4A2Q12974 167 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 SLC5A9Q2M3M2 681 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 SOWAHAQ2M3V2 549 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 TBCELQ5QJ74 424 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 ARHGAP17Q68EM7 881 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 CCDC81Q6ZN84 652 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 LPCAT2Q7L5N7 544 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 NET1Q7Z628 596 aaPredicted RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 CD274Q9NZQ7 290 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 SFMBT1Q9UHJ3 866 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 FAM95CA0A1B0GW59 222 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 MRASO14807 208 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 EDN1P05305 212 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 T-ENOLP0DO92 83 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 VCLP18206 1134 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 PIK3R1P27986 724 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 MPP1Q00013 466 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 SEMA5AQ13591 1074 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 MOGSQ13724 837 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 C10orf120Q5SQS8 335 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 MARK2Q7KZI7 788 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 FASTKD5Q7L8L6 764 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 SLCO2A1Q92959 643 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 DRC3Q9H069 523 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 COPG2Q9UBF2 871 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 MAFBQ9Y5Q3 323 aaPredicted RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 AP4B1Q9Y6B7 739 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 IRS2Q9Y4H2 1338 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 E7ENQ6 273 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 PLIN3O60664 434 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 FAM58BPP0C7Q3 252 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 FGFR1P11362 822 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 CCNB1P14635 433 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 PPIDQ08752 370 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 CCDC15Q0P6D6 951 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 STX5Q13190 355 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 LBRQ14739 615 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 ZRANB3Q5FWF4 1079 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 ZNF484Q5JVG2 852 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 FKBP1CQ5VVH2 108 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 ILDR2Q71H61 639 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 MILR1Q7Z6M3 343 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 SPATA17Q96L03 361 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 PANX3Q96QZ0 392 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 THUMPD3Q9BV44 507 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 GATA5Q9BWX5 397 aaPredicted RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 PCDHAC1Q9H158 963 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 EML4Q9HC35 981 aaKnown RBP13.54□□□□□ -0.24
CASC4-201ENST00000299957 CDH22Q9UJ99 828 aa13.54□□□□□ -0.24
CASC4-201ENST00000299957 TTC24A2A3L6 582 aaPredicted RBP13.53□□□□□ -0.24
CASC4-201ENST00000299957 MYO1GB0I1T2 1018 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 SLC25A11Q02978 314 aaKnown RBP13.53□□□□□ -0.24
CASC4-201ENST00000299957 CDH17Q12864 832 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 DLG1Q12959 904 aa13.53□□□□□ -0.24
CASC4-201ENST00000299957 PRKD1Q15139 912 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms