RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 USP21Q9UK80 565 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 V9GYQ6 96 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 COL14A1Q05707 1796 aaKnown RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 C1orf232A0A0U1RR37 186 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 FAM149AA5PLN7 773 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 MAFGO15525 162 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 FAM189A1O60320 539 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 KCNA2P16389 499 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 ZNF23P17027 643 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 CHRNA5P30532 468 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 EFNA5P52803 228 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 NDST2P52849 883 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 SLC10A2Q12908 348 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 Q3C1V9 767 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 SPDYE2Q495Y8 402 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 PITRM1Q5JRX3 1037 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 ATF7IP2Q5U623 682 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 FSTL4Q6MZW2 842 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 ACOT1Q86TX2 421 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 LPGAT1Q92604 370 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 HPDLQ96IR7 371 aa11.63□□□□□ -0.55
TRUB1-201ENST00000298746 WARS2Q9UGM6 360 aaKnown RBP11.63□□□□□ -0.55
TRUB1-201ENST00000298746 A0A087WXM4 84 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 HEATR9A2RTY3 570 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 NFICP08651 508 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 ADORA2BP29275 332 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 PRDX6P30041 224 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 GRIA3P42263 894 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 TRAF2Q12933 501 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 ZNF423Q2M1K9 1284 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 KIF19Q2TAC6 998 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 C4orf22Q6V702 233 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 TIFABQ6ZNK6 161 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 TTC16Q8NEE8 873 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 KBTBD7Q8WVZ9 684 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 CPNE1Q99829 537 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 MOCS1Q9NZB8 636 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 CDC14AQ9UNH5 594 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 RAP2CQ9Y3L5 183 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 MFHAS1Q9Y4C4 1052 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 TMEM233B4DJY2 109 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 J3QRK9 145 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 TRIM38O00635 465 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 B4GALT5O43286 388 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 ZBTB11O95625 1053 aaPredicted RBP11.62□□□□□ -0.55
TRUB1-201ENST00000298746 VDRP11473 427 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 GOT1P17174 413 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 HARS2P49590 506 aaKnown RBP11.62□□□□□ -0.55
TRUB1-201ENST00000298746 EIF2B2P49770 351 aaKnown RBP11.62□□□□□ -0.55
TRUB1-201ENST00000298746 PRKAA1Q13131 559 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 GRTP1Q5TC63 336 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 ABHD15Q6UXT9 468 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRUB1-201ENST00000298746 OR6B3Q8NGW1 331 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 C12orf43Q96C57 262 aaKnown RBP11.62□□□□□ -0.55
TRUB1-201ENST00000298746 FBXL8Q96CD0 374 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 ABHD8Q96I13 439 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 MRIQ9BWK5 157 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 POLR1BQ9H9Y6 1135 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 PLAC1Q9HBJ0 212 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 TRNAU1APQ9NX07 287 aaKnown RBP11.62□□□□□ -0.55
TRUB1-201ENST00000298746 SYNPO2Q9UMS6 1093 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 HES2Q9Y543 173 aa11.62□□□□□ -0.55
TRUB1-201ENST00000298746 A0A0A0MRY4 1105 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 C7orf72A4D263 438 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 CBFA2T3O75081 653 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 CLIC3O95833 236 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 CCDC130P13994 396 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 HDCP19113 662 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 TPSB2P20231 275 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 CDH5P33151 784 aaPredicted RBP11.61□□□□□ -0.55
TRUB1-201ENST00000298746 CASP2P42575 452 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 GPD2P43304 727 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 ITGADQ13349 1161 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 IKBKEQ14164 716 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 RPS6KA2Q15349 733 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 TPSAB1Q15661 275 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 AMHR2Q16671 573 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 PIGGQ5H8A4 983 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 EEF1DP3Q658K8 133 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 OGFOD2Q6N063 350 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 ATG14Q6ZNE5 492 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 NLGN1Q8N2Q7 840 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 MCRS1Q96EZ8 462 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 SPATA13Q96N96 652 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 NT5C1AQ9BXI3 368 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 PCDHGA4Q9Y5G9 962 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 COQ9O75208 318 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 HNRNPLP14866 589 aaKnown RBP eCLIP11.61□□□□□ -0.55
TRUB1-201ENST00000298746 EEF1DP29692 281 aaKnown RBP11.61□□□□□ -0.55
TRUB1-201ENST00000298746 SULT2A1Q06520 285 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 STX5Q13190 355 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 NME3Q13232 169 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 INSCQ1MX18 579 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 ZPBP2Q6X784 338 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 TMEM192Q8IY95 271 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 SIX6OS1Q8N1H7 587 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 PYROXD2Q8N2H3 581 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 AFAP1L2Q8N4X5 818 aa11.61□□□□□ -0.55
TRUB1-201ENST00000298746 KCTD4Q8WVF5 259 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms