RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 SETD3Q86TU7 594 aaPredicted RBP25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 KIAA1958Q8N8K9 716 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 HJURPQ8NCD3 748 aaPredicted RBP25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 TTC16Q8NEE8 873 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 OR52K2Q8NGK3 314 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 CCDC110Q8TBZ0 833 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 FATE1Q969F0 183 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 HMCESQ96FZ2 354 aa25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 TPX2Q9ULW0 747 aaKnown RBP25.22■■□□□ 1.63
GTF2A1-201ENST00000298173 A0A0A0MRY4 1105 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 ARHGAP42A6NI28 874 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 KCNK1O00180 336 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 SOX1O00570 391 aaPredicted RBP25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 PTPN3P26045 913 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 ITGA8P53708 1063 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 CALCOCO2Q13137 446 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 ANKRD20A2Q5SQ80 823 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 ANKRD20A1Q5TYW2 823 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 ANKRD20A3Q5VUR7 823 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 HIBCHQ6NVY1 386 aaPredicted RBP25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 ATPAF2Q8N5M1 289 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 CELF5Q8N6W0 485 aaKnown RBP25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 TDRD5Q8NAT2 981 aaKnown RBP25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 SPATA13Q96N96 652 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 LRRC3BQ96PB8 259 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 FERMT1Q9BQL6 677 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 MAGEH1Q9H213 219 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 KIF9Q9HAQ2 790 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 GDE1Q9NZC3 331 aa25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 IPO11Q9UI26 975 aaKnown RBP25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 FARP1Q9Y4F1 1045 aaPredicted RBP25.21■■□□□ 1.63
GTF2A1-201ENST00000298173 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 RNF103O00237 685 aa25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 TBL1XO60907 577 aa25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 FAM153BP0C7A2 387 aa25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 ACTN2P35609 894 aa25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 ZNF177Q13360 481 aaPredicted RBP25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 FAM153CQ494X1 144 aa25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 ATAT1Q5SQI0 421 aa25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 RNASEH2BQ5TBB1 312 aaKnown RBP25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 IZUMO3Q5VZ72 239 aa25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 ARHGEF2Q92974 986 aaKnown RBP25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 ASB16Q96NS5 453 aa25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 FAM153AQ9UHL3 310 aa25.2■■□□□ 1.63
GTF2A1-201ENST00000298173 DOCK8Q8NF50 2099 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 SZT2Q5T011 3432 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 ILVBLA1L0T0 632 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 MATN3O15232 486 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 PEX11BO96011 259 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 GNA12Q03113 381 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 CAV1Q03135 178 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 SERINC3Q13530 473 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 MAP9Q49MG5 647 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 MPPE1Q53F39 396 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 TEX44Q53QW1 395 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 FAM78AQ5JUQ0 283 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 C6orf118Q5T5N4 469 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 CXorf57Q6NSI4 855 aaKnown RBP25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 EMBQ6PCB8 327 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 ZNF567Q8N184 647 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 CPT1BQ92523 772 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 VAT1Q99536 393 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 TBC1D14Q9P2M4 693 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 ANAPC5Q9UJX4 755 aa25.2■■□□□ 1.62
GTF2A1-201ENST00000298173 MYOFQ9NZM1 2061 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 A0A0D9SEW6 157 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 OPHN1O60890 802 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 IFI35P80217 286 aaPredicted RBP25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 TIGD7Q6NT04 549 aaPredicted RBP25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 PCGF5Q86SE9 256 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 MAML1Q92585 1016 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 SMARCD2Q92925 531 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 RSPRY1Q96DX4 576 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 MSLNLQ96KJ4 702 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 IL12RB2Q99665 862 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 LINC00597Q9H2U6 94 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 TRPV4Q9HBA0 871 aa25.19■■□□□ 1.62
GTF2A1-201ENST00000298173 STK10O94804 968 aaKnown RBP25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 LUC7L3O95232 432 aaKnown RBP25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 METTL18O95568 372 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 ACVRL1P37023 503 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 ZBTB17Q13105 803 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 CES5AQ6NT32 575 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 ZNF783Q6ZMS7 281 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 ADGRG2Q8IZP9 1017 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 NAT8LQ8N9F0 302 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 OTUB2Q96DC9 234 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 ARFGAP3Q9NP61 516 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 CLDND1Q9NY35 253 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 SEPT10Q9P0V9 454 aa25.18■■□□□ 1.62
GTF2A1-201ENST00000298173 TYW5A2RUC4 315 aaKnown RBP25.17■■□□□ 1.62
GTF2A1-201ENST00000298173 CCNB1P14635 433 aa25.17■■□□□ 1.62
GTF2A1-201ENST00000298173 HOXD9P28356 352 aaPredicted RBP25.17■■□□□ 1.62
GTF2A1-201ENST00000298173 MORF4L2Q15014 288 aa25.17■■□□□ 1.62
GTF2A1-201ENST00000298173 FSCBQ5H9T9 825 aa25.17■■□□□ 1.62
GTF2A1-201ENST00000298173 FYB2Q5VWT5 728 aa25.17■■□□□ 1.62
GTF2A1-201ENST00000298173 GET4Q7L5D6 327 aaPredicted RBP25.17■■□□□ 1.62
GTF2A1-201ENST00000298173 DDI1Q8WTU0 396 aa25.17■■□□□ 1.62
GTF2A1-201ENST00000298173 CAVIN3Q969G5 261 aa25.17■■□□□ 1.62
GTF2A1-201ENST00000298173 PABPC5Q96DU9 382 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms