RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 GALNT4Q8N4A0 578 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 DPP10Q8N608 796 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 MTFMTQ96DP5 389 aaKnown RBP7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 IL25Q9H293 177 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 CCDC134Q9H6E4 229 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 OPTCQ9UBM4 332 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 PIK3CDO00329 1044 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 LGR5O75473 907 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 VAPBO95292 243 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 PABPC1P11940 636 aaKnown RBP7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 CPA3P15088 417 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 PSMD8P48556 350 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 SEC13P55735 322 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 CHRNB3Q05901 458 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 DUSP4Q13115 394 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 CCNI2Q6ZMN8 369 aaPredicted RBP7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 SLC26A11Q86WA9 606 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 RASAL3Q86YV0 1011 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 ACTL9Q8TC94 416 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 KCNB2Q92953 911 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 RERGLQ9H628 205 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 ADAM21Q9UKJ8 722 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 PSME2Q9UL46 239 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 TFR2Q9UP52 801 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 PLAGL2Q9UPG8 496 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 PTCH2Q9Y6C5 1203 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 CASZ1Q86V15 1759 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 ZSCAN5CA6NGD5 496 aaPredicted RBP7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 TK2O00142 265 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 TLR5O60602 858 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 AVILO75366 819 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 PSMD10O75832 226 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 ALBP02768 609 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 SLC35G4P0C7Q5 338 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 ACRP10323 421 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 SKIV2L2P42285 1042 aaKnown RBP7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 COPAP53621 1224 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 ALKBH2Q6NS38 261 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 GATAD2AQ86YP4 633 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 NPAS4Q8IUM7 802 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 TOP6BLQ8N6T0 577 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 STARD8Q92502 1023 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 COL26A1Q96A83 441 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 DEPDC7Q96QD5 511 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 PAFAH2Q99487 392 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 CPNE1Q99829 537 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 C11orf84Q9BUA3 381 aaPredicted RBP7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 SEZ6LQ9BYH1 1024 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 SLC39A8Q9C0K1 460 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 ANKRD6Q9Y2G4 727 aa7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 CAB39Q9Y376 341 aaPredicted RBP7.04□□□□□ -1.28
GAPVD1-202ENST00000297933 KCNK1O00180 336 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 TM9SF1O15321 606 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 MAGEC1O60732 1142 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 SH3BGRLO75368 114 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 USP1O94782 785 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 ELFN1P0C7U0 828 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 THRAP10827 490 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 MIPP30301 263 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 PTENP60484 403 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 IL2P60568 153 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 GRSF1Q12849 480 aaKnown RBP eCLIP7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 RAB30Q15771 203 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 LRRC36Q1X8D7 754 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 MPPE1Q53F39 396 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 RBM43Q6ZSC3 357 aaKnown RBP7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 FAM183BPQ6ZVS7 135 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 PTF1AQ7RTS3 328 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 FGD2Q7Z6J4 655 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 GPSM1Q86YR5 675 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 NRSN1Q8IZ57 195 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 C12orf50Q8NA57 414 aaPredicted RBP7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 SPPL2BQ8TCT7 592 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 DTX3LQ8TDB6 740 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 HSFY1Q96LI6 401 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 TMEM237Q96Q45 408 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 PCDH9Q9HC56 1237 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 OSGEPQ9NPF4 335 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 C2CD2Q9Y426 696 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 FAM220BPB1ANY3 271 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 EIF3HO15372 352 aaKnown RBP eCLIP7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 RGS14O43566 566 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 PTPN2P17706 415 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 WASP42768 502 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 APLP1P51693 650 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 COPZ1P61923 177 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 GRM3Q14832 879 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 AGGF1Q8N302 714 aaeCLIP7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 EFCAB3Q8N7B9 438 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 ATL1Q8WXF7 558 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 NSL1Q96IY1 281 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 RNPEPQ9H4A4 650 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 RAD21L1Q9H4I0 556 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 BPIFA1Q9NP55 256 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 PIH1D1Q9NWS0 290 aaKnown RBP7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 DUS2Q9NX74 493 aaKnown RBP7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 IL1RAPL1Q9NZN1 696 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 TMEM131LA2VDJ0 1609 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 DEPDC5O75140 1603 aa7.03□□□□□ -1.28
GAPVD1-202ENST00000297933 CNTNAP1P78357 1384 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms