RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SLC16A1P53985 500 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 ANKS6Q68DC2 871 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 MILR1Q7Z6M3 343 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 PWWP2AQ96N64 755 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 MIEF1Q9NQG6 463 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 ZNF446Q9NWS9 450 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 FKBP6O75344 327 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 CCNB1P14635 433 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 RRM2P31350 389 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 KPNB1Q14974 876 aaKnown RBP17.52■□□□□ 0.39
CDCP1-201ENST00000296129 TRMT5Q32P41 509 aaKnown RBP17.52■□□□□ 0.39
CDCP1-201ENST00000296129 HSDL1Q3SXM5 330 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 KREMEN1Q96MU8 473 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 PCDHB18PQ96TA0 734 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 PDP2Q9P2J9 529 aa17.52■□□□□ 0.39
CDCP1-201ENST00000296129 MSCO60682 206 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 DAB1O75553 588 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 SP3Q02447 781 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 TBCELQ5QJ74 424 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 CACUL1Q86Y37 369 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 SLC27A5Q9Y2P5 690 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 ABCB1P08183 1280 aaPredicted RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 TRAF2Q12933 501 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 MAD2L1Q13257 205 aaPredicted RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 TRIM60Q495X7 471 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 HECTD3Q5T447 861 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 C9orf57Q5W0N0 161 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 IRF2BP1Q8IU81 584 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 DENND1CQ8IV53 801 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 FIG4Q92562 907 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 GFM2Q969S9 779 aaKnown RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 CAMKK2Q96RR4 588 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 TMEM51Q9NW97 253 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 CROTQ9UKG9 612 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 SNX8Q9Y5X2 465 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 SEC22BO75396 215 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 CBX6O95503 412 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 ZCCHC18P0CG32 403 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 RPL9P32969 192 aaKnown RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 CCL23P55773 120 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 RUNX1T1Q06455 604 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 AUHQ13825 339 aaKnown RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 NEPROQ6NW34 567 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 MAGED4Q96JG8 741 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 FAM50BQ9Y247 325 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 NDUFAF1Q9Y375 327 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 CYP1A1P04798 512 aaPredicted RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 PRKAR2AP13861 404 aaKnown RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 POLR2EP19388 210 aaKnown RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 ALDH9A1P49189 494 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 BLVRAP53004 296 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 MRPS5P82675 430 aaKnown RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 SH3BP5LQ7L8J4 393 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 ZNF558Q96NG5 402 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 ZYG11BQ9C0D3 744 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 IGFLR1Q9H665 355 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 FBXO6Q9NRD1 293 aaPredicted RBP17.51■□□□□ 0.39
CDCP1-201ENST00000296129 MORF4L1Q9UBU8 362 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 COL1A2P08123 1366 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 CCDC154A6NI56 674 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 SGCGQ13326 291 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 DOK6Q6PKX4 331 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 POLNQ7Z5Q5 900 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 METTL6Q8TCB7 284 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 LZTS1Q9Y250 596 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 GIT1Q9Y2X7 761 aa17.51■□□□□ 0.39
CDCP1-201ENST00000296129 SAC3D1A6NKF1 404 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 BUD23O43709 281 aaKnown RBP17.5■□□□□ 0.39
CDCP1-201ENST00000296129 DUPD1Q68J44 220 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 ZNF614Q8N883 585 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 RIN3Q8TB24 985 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 PHF21AQ96BD5 680 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 TSEN34Q9BSV6 310 aaKnown RBP17.5■□□□□ 0.39
CDCP1-201ENST00000296129 COMMD8Q9NX08 183 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 CACNA2D2Q9NY47 1150 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 ZNF711Q9Y462 761 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 SMNDC1O75940 238 aaKnown RBP eCLIP17.5■□□□□ 0.39
CDCP1-201ENST00000296129 MICU2Q8IYU8 434 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 C10orf53Q8N6V4 93 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 HGH1Q9BTY7 390 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 TMCC3Q9ULS5 477 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
CDCP1-201ENST00000296129 SERPINA4P29622 427 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 VAC14Q08AM6 782 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 RD3Q7Z3Z2 195 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 TOP6BLQ8N6T0 577 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 CERS2Q96G23 380 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 ALG9Q9H6U8 611 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 SH3BP4Q9P0V3 963 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 ZNF862O60290 1169 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 IMPDH2P12268 514 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 PABPC1LQ4VXU2 614 aaKnown RBP17.5■□□□□ 0.39
CDCP1-201ENST00000296129 ZCWPW2Q504Y3 356 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 OLFML2BQ68BL8 750 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 LRRC52Q8N7C0 313 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 JOSD2Q8TAC2 188 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 LGMNQ99538 433 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 DUSP16Q9BY84 665 aa17.5■□□□□ 0.39
CDCP1-201ENST00000296129 ZCCHC2Q9C0B9 1178 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms