RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TBC1D19Q8N5T2 526 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 FBXO44Q9H4M3 255 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 ITGA11Q9UKX5 1188 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 DRG1Q9Y295 367 aaKnown RBP13.68□□□□□ -0.22
HPS3-201ENST00000296051 MYH15Q9Y2K3 1946 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 MON2Q7Z3U7 1717 aa13.68□□□□□ -0.22
HPS3-201ENST00000296051 LINC00854A0A1B0GVQ3 168 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 INHAP05111 366 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 CYP3A4P08684 503 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 HOXC6P09630 235 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 HOXD13P35453 343 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 RTP1P59025 263 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 MRPS15P82914 257 aaKnown RBP13.67□□□□□ -0.22
HPS3-201ENST00000296051 MAPK11Q15759 364 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 UGP2Q16851 508 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 CELF6Q96J87 481 aaKnown RBP13.67□□□□□ -0.22
HPS3-201ENST00000296051 DACH2Q96NX9 599 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 KLHL25Q9H0H3 589 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 EBF3Q9H4W6 596 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 CYP3A43Q9HB55 503 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 NOCTQ9UK39 431 aaKnown RBP13.67□□□□□ -0.22
HPS3-201ENST00000296051 TCF4P15884 667 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 ADIGQ0VDE8 80 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 CRHR2Q13324 411 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 ZACNQ401N2 412 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 TBCELQ5QJ74 424 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 SLAIN1Q8ND83 568 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 PHF12Q96QT6 1004 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 GAS2L1Q99501 681 aaPredicted RBP13.67□□□□□ -0.22
HPS3-201ENST00000296051 LRRC40Q9H9A6 602 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 PALMDQ9NP74 551 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 ETNK2Q9NVF9 386 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 AP4B1Q9Y6B7 739 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 C15orf38-AP3S2A0A0A6YYH1 394 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 KPNA3O00505 521 aaPredicted RBP13.67□□□□□ -0.22
HPS3-201ENST00000296051 GP5P40197 560 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 RPL5P46777 297 aaKnown RBP13.67□□□□□ -0.22
HPS3-201ENST00000296051 RBBP7Q16576 425 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 ARPINQ7Z6K5 226 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 TMCO5AQ8N6Q1 288 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 OMDQ99983 421 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 BARX2Q9UMQ3 279 aaPredicted RBP13.67□□□□□ -0.22
HPS3-201ENST00000296051 ACOT9Q9Y305 439 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 ITGAVP06756 1048 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 SPATA31D3P0C874 917 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 BST2Q10589 180 aaKnown RBP13.67□□□□□ -0.22
HPS3-201ENST00000296051 RETSATQ6NUM9 610 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 SPATA31D4Q6ZUB0 917 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 C10orf82Q8WW14 230 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 ZNF333Q96JL9 665 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 TUBGCP5Q96RT8 1024 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 GID8Q9NWU2 228 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 FBXO10Q9UK96 956 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 PIK3C2AO00443 1686 aa13.67□□□□□ -0.22
HPS3-201ENST00000296051 NCF1BA6NI72 391 aaPredicted RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 NCF1CA8MVU1 366 aaPredicted RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 COX4I1P13073 169 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 NCF1P14598 390 aaPredicted RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 VCLP18206 1134 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 TSPAN8P19075 237 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 HSPA13P48723 471 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 RPS6KA3P51812 740 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 GDF10P55107 478 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 USP46P62068 366 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 SGO1Q5FBB7 561 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 WSCD1Q658N2 575 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 REM2Q8IYK8 340 aaPredicted RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 LZICQ8WZA0 190 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 MMADHCQ9H3L0 296 aaPredicted RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 WDR41Q9HAD4 459 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 COMMD3-BMI1R4GMX3 469 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 ATP6AP2A0A1C7CYW4 349 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 LIN7AO14910 233 aaPredicted RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 INPP4BO15327 924 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 ATP6AP2O75787 350 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 MICAL2O94851 1124 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 CXCL14O95715 111 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 FGBP02675 491 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 INPP1P49441 399 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 PDK2Q15119 407 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 BBS12Q6ZW61 710 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 SATL1Q86VE3 508 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 C10orf107Q8IVU9 208 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 MICU2Q8IYU8 434 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
HPS3-201ENST00000296051 RCN3Q96D15 328 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 EBF4Q9BQW3 602 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 FTHL17Q9BXU8 183 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 SYNPO2Q9UMS6 1093 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 MYO1GB0I1T2 1018 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 BAIAP3O94812 1187 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 PYGLP06737 847 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 CFHP08603 1231 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 MAPTP10636 758 aaKnown RBP13.66□□□□□ -0.22
HPS3-201ENST00000296051 ARHGDIAP52565 204 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 TBX4P57082 545 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 GSTA3Q16772 222 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 TATDN1Q6P1N9 297 aa13.66□□□□□ -0.22
HPS3-201ENST00000296051 C11orf96Q7Z7L8 435 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms