RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 NXPE3Q969Y0 559 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 ASB2Q96Q27 587 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 SPON2Q9BUD6 331 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 LRRC19Q9H756 370 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 ANKZF1Q9H8Y5 726 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 ABCB8Q9NUT2 735 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 DNAJC17Q9NVM6 304 aaKnown RBP15.53■□□□□ 0.08
CCDC140-201ENST00000295226 ZNF446Q9NWS9 450 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 TTC7AQ9ULT0 858 aaPredicted RBP15.53■□□□□ 0.08
CCDC140-201ENST00000295226 TBC1D30Q9Y2I9 924 aa15.53■□□□□ 0.08
CCDC140-201ENST00000295226 MIA3Q5JRA6 1907 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 RASA4BC9J798 803 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 KRIT1O00522 736 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 RASA4O43374 803 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 RAMP2O60895 175 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 ZFXP17010 805 aaPredicted RBP15.52■□□□□ 0.08
CCDC140-201ENST00000295226 TGM2P21980 687 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 GLDCP23378 1020 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 MAPKAPK2P49137 400 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 PAPOLAP51003 745 aaKnown RBP15.52■□□□□ 0.08
CCDC140-201ENST00000295226 GNA12Q03113 381 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 POLD3Q15054 466 aaPredicted RBP15.52■□□□□ 0.08
CCDC140-201ENST00000295226 AFMIDQ63HM1 303 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 RNF43Q68DV7 783 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 ZNF354CQ86Y25 554 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 UMODL1-AS1Q8N2C9 162 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 PRELID2Q8N945 189 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 FIBINQ8TAL6 211 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 CSGALNACT1Q8TDX6 532 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 ATXN2LQ8WWM7 1075 aaKnown RBP15.52■□□□□ 0.08
CCDC140-201ENST00000295226 LMLNQ96KR4 655 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 LGMNQ99538 433 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 MUC3BQ9H195 1237 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 HEBP1Q9NRV9 189 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 ACTL7AQ9Y615 435 aa15.52■□□□□ 0.08
CCDC140-201ENST00000295226 VCANP13611 3396 aa15.52■□□□□ 0.07
CCDC140-201ENST00000295226 APOC4-APOC2K7ER74 178 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 CACNG3O60359 315 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 TULP3O75386 442 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 APOC2P02655 101 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 CISD3P0C7P0 127 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 PAFAH1B1P43034 410 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 KDSRQ06136 332 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 NR1H3Q13133 447 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 TDGQ13569 410 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 C6orf118Q5T5N4 469 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 ETFBKMTQ8IXQ9 262 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 ARHGEF2Q92974 986 aaKnown RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 NECAB3Q96P71 396 aaPredicted RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 FEM1AQ9BSK4 669 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 FBRSL1Q9HCM7 1045 aaKnown RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 PRKAG3Q9UGI9 489 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 INTS6Q9UL03 887 aaKnown RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 DNPEPQ9ULA0 475 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 NYNRINQ9P2P1 1898 aaKnown RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 COL4A3Q01955 1670 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 SHROOM3Q8TF72 1996 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 ILVBLA1L0T0 632 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 ANTXRLA6NF34 631 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 SNAP91O60641 907 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 SERPINB6P35237 376 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 OPRD1P41143 372 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 KCNJ1P48048 391 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 NDST2P52849 883 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 EIF3EP60228 445 aaKnown RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 FAM193AP78312 1265 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 NOMO1Q15155 1222 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 GEN1Q17RS7 908 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 MAP9Q49MG5 647 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 IL31Q6EBC2 164 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 SETD3Q86TU7 594 aaPredicted RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 CCDC117Q8IWD4 279 aaPredicted RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 LZTR1Q8N653 840 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 CCNYQ8ND76 341 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 ALG14Q96F25 216 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 XPO6Q96QU8 1125 aaKnown RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 CD320Q9NPF0 282 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 KIAA1522Q9P206 1035 aaPredicted RBP15.51■□□□□ 0.07
CCDC140-201ENST00000295226 FBXO10Q9UK96 956 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 OR51B4Q9Y5P0 310 aa15.51■□□□□ 0.07
CCDC140-201ENST00000295226 F5P12259 2224 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 C19orf67A6NJJ6 358 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 H7C0C1 242 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 J3KR12 359 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 ATP5OP48047 213 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 DGKGP49619 791 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 NRLP54845 237 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 C2orf54Q08AI8 447 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 GALNT2Q10471 571 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 FUT11Q495W5 492 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 TMEM215Q68D42 235 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 TXNDC11Q6PKC3 985 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 SORCS1Q8WY21 1168 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 OLFM3Q96PB7 478 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 NAP1L3Q99457 506 aaPredicted RBP15.5■□□□□ 0.07
CCDC140-201ENST00000295226 RBM12Q9NTZ6 932 aaKnown RBP15.5■□□□□ 0.07
CCDC140-201ENST00000295226 GGA2Q9UJY4 613 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 VPS28Q9UK41 221 aa15.5■□□□□ 0.07
CCDC140-201ENST00000295226 CHD5Q8TDI0 1954 aa15.49■□□□□ 0.07
CCDC140-201ENST00000295226 CBX4O00257 560 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms