RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 CBWD1Q9BRT8 395 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 PIGUQ9H490 435 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 C17orf75Q9HAS0 396 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 PCDH18Q9HCL0 1135 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 NINJ2Q9NZG7 142 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF232Q9UNY5 417 aa10.93□□□□□ -0.66
PKNOX1-201ENST00000291547 KBTBD13C9JR72 458 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 SPTLC1O15269 473 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 CD3EAPO15446 510 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 HBP1O60381 514 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 TSPAN3O60637 253 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 OXCT1P55809 520 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 LSM3P62310 102 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 COMMD2Q86X83 199 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 BHLHE22Q8NFJ8 381 aaPredicted RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 DLG3Q92796 817 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 PGM2Q96G03 612 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 TBCDQ9BTW9 1192 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 ADI1Q9BV57 179 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 NT5MQ9NPB1 228 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 ZNF70Q9UC06 446 aaPredicted RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 SIK3Q9Y2K2 1263 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 FAM205AQ6ZU69 1335 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 TCRBV5S4A2TA0A5A2 114 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 WTIPA6NIX2 430 aaPredicted RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 DYRK3O43781 588 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 SEC22BO75396 215 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 SPIRE1Q08AE8 756 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 STARD3Q14849 445 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 BPIFB6Q8NFQ5 453 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 PSMA8Q8TAA3 256 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 TUBGCP5Q96RT8 1024 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 DCLK3Q9C098 648 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 EPB41L1Q9H4G0 881 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 OR6B1O95007 311 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 NFICP08651 508 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 TPH1P17752 444 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 LBPP18428 481 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 RASA1P20936 1047 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 PTPAQ15257 358 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 PDCD4Q53EL6 469 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 FAM117BQ6P1L5 589 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 C15orf52Q6ZUT6 534 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 PEX5LQ8IYB4 626 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 SCAIQ8N9R8 606 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 REEP1Q9H902 201 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 SLC25A13Q9UJS0 675 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 ANAPC2Q9UJX6 822 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 MAGEB16A2A368 324 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 ZC3H11AO75152 810 aaKnown RBP eCLIP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 DBTP11182 482 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 JAK1P23458 1154 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 RPL5P46777 297 aaKnown RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 GMPSP49915 693 aaPredicted RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 PRKAA2P54646 552 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 NR1H2P55055 460 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 USP46P62068 366 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 FAAP100Q0VG06 881 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 INO80DQ53TQ3 878 aaPredicted RBP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 TTC23Q5W5X9 447 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 PMF1Q6P1K2 205 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 ZBTB46Q86UZ6 589 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 PHACTR4Q8IZ21 702 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 TAS1R2Q8TE23 839 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 KATNAL1Q9BW62 490 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 SCUBE2Q9NQ36 999 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 GPRC5CQ9NQ84 441 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 PDGFCQ9NRA1 345 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 RBM22Q9NW64 420 aaKnown RBP eCLIP10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 GGA3Q9NZ52 723 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 KLK14Q9P0G3 267 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 STARD13Q9Y3M8 1113 aa10.92□□□□□ -0.66
PKNOX1-201ENST00000291547 C5orf60A6NFR6 353 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 NDUFB5O43674 189 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 CSDE1O75534 798 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 STAU1O95793 577 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 CCNA2P20248 432 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 FRG1Q14331 258 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 CMPK2Q5EBM0 449 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 C16orf86Q6ZW13 317 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 TAF8Q7Z7C8 310 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 ADGRA1Q86SQ6 560 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 TTC7BQ86TV6 843 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 SLC47A2Q86VL8 602 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 GATAD2AQ86YP4 633 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 CEP41Q9BYV8 373 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 SEMA6BQ9H3T3 888 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 ARMC7Q9H6L4 198 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 COMMD9Q9P000 198 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 CRNNQ9UBG3 495 aaPredicted RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 PRKAG3Q9UGI9 489 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 POLR1DQ9Y2S0 133 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 CCDC182A6NF36 153 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 SLC37A4O43826 429 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 HOXD10P28358 340 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 LRPAP1P30533 357 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 RXRGP48443 463 aa10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 PTDSS1P48651 473 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 CLK2P49760 499 aaKnown RBP10.91□□□□□ -0.66
PKNOX1-201ENST00000291547 EPS8Q12929 822 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms