RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 TCF7L2Q9NQB0 619 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 RGS18Q9NS28 235 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TRMT6Q9UJA5 497 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 ACOT9Q9Y305 439 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 AAR2Q9Y312 384 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 PCDHA11Q9Y5I1 949 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ADAMTSL1Q8N6G6 1762 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 DDX60LQ5H9U9 1706 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 ZSCAN9O15535 394 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 RHOCP08134 193 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CCDC166P0CW27 439 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 VHLP40337 213 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MMP13P45452 471 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 DSG1Q02413 1049 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 OTUD3Q5T2D3 398 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 AGAP9Q5VTM2 703 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PLEKHA7Q6IQ23 1121 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 LINGO4Q6UY18 593 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 RINLQ6ZS11 566 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PLPPR4Q7Z2D5 763 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TRABD2AQ86V40 505 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PPTC7Q8NI37 304 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MED8Q96G25 268 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TMEM169Q96HH4 297 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SERAC1Q96JX3 654 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CSPG4P5Q96PW8 444 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SYT17Q9BSW7 474 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 COPS7BQ9H9Q2 264 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 MID1IP1Q9NPA3 183 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TAGLN3Q9UI15 199 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 A0A0A0MRY4 1105 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 A0A1W2PQH9 124 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ARHGAP10A1A4S6 786 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CXorf49A8MYA2 514 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 ZBTB24O43167 697 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 KIF1CO43896 1103 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 RAMP2O60895 175 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TBX18O95935 607 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 AKR1A1P14550 325 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PGAM1P18669 254 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 FOXN2P32314 431 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 NOS2P35228 1153 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 FLT3LGP49771 235 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PEX5P50542 639 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MPP1Q00013 466 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 DUSP4Q13115 394 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SYTL3Q4VX76 610 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ECHDC2Q86YB7 292 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ANKRD52Q8NB46 1076 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 GRIN3AQ8TCU5 1115 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SPATA13Q96N96 652 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 COG4Q9H9E3 785 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 NMRAL1Q9HBL8 299 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 FAM105AQ9NUU6 356 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 WWOXQ9NZC7 414 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PCDH10Q9P2E7 1040 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 STRNO43815 780 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CCNT2O60583 730 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 DDHD2O94830 711 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 GLP2RO95838 553 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 HOXC6P09630 235 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 RAG1P15918 1043 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 GEMP55040 296 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MRPS6P82932 125 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 DLG2Q15700 870 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 UGP2Q16851 508 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ZNF697Q5TEC3 545 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SYPL2Q5VXT5 272 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CCDC81Q6ZN84 652 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 RPS27LQ71UM5 84 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 GLT6D1Q7Z4J2 308 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 LINC00523Q86TU6 105 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 RIN3Q8TB24 985 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ATXN2LQ8WWM7 1075 aaKnown RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 MIEF2Q96C03 454 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MBOAT7Q96N66 472 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SLC8A2Q9UPR5 921 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 MCM3APO60318 1980 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ARID1BQ8NFD5 2236 aaPredicted RBP4.87□□□□□ -1.63
UBR1-201ENST00000290650 FAM95CA0A1B0GW59 222 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PRR5-ARHGAP8B1AHC4 643 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 GRIN3BO60391 1043 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 TMEM63AO94886 807 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 FKBP9O95302 570 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 NNMTP40261 264 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 GRIA4P48058 902 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PIK3CGP48736 1102 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 OXCT1P55809 520 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ARHGAP8P85298 464 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 CDK16Q00536 496 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ARHGEF7Q14155 803 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SOWAHAQ2M3V2 549 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 AP5B1Q2VPB7 878 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 SNX30Q5VWJ9 437 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 IQSEC1Q6DN90 963 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 PPP4R4Q6NUP7 873 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 NAPRTQ6XQN6 538 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 HFE2Q6ZVN8 426 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 FKBP9P1Q75LS8 142 aa4.87□□□□□ -1.63
UBR1-201ENST00000290650 ZNF410Q86VK4 478 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms