RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 IRF2BP1Q8IU81 584 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 FMN2Q9NZ56 1722 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 DCDC2CA8MYV0 355 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 PSMD10O75832 226 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 IMPDH2P12268 514 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 VCLP18206 1134 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 CSE1LP55060 971 aaKnown RBP17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 EVX2Q03828 476 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 VAC14Q08AM6 782 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 TMC7Q7Z402 723 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 COLGALT1Q8NBJ5 622 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 RAPGEFL1Q9UHV5 662 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 ASTN1O14525 1302 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 ATG7O95352 703 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 POLR2EP19388 210 aaKnown RBP17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 ARPC4P59998 168 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 PPATQ06203 517 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 FAXCQ5TGI0 409 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 CHSY1Q86X52 802 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 ATG16L2Q8NAA4 619 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 STARD8Q92502 1023 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 KCTD10Q9H3F6 313 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 KRT84Q9NSB2 600 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 CDH9Q9ULB4 789 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 EFR3BQ9Y2G0 817 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 TK2O00142 265 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 OR1G1P47890 313 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 POLD3Q15054 466 aaPredicted RBP17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 NBPF12Q5TAG4 269 aaPredicted RBP17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 SLFN11Q7Z7L1 901 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 ITFG1Q8TB96 612 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 LNX1Q8TBB1 728 aaPredicted RBP17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 RASSF5Q8WWW0 418 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 AP4E1Q9UPM8 1137 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 V9GYQ6 96 aa17.82■□□□□ 0.44
PCDHA13-201ENST00000289272 EFCAB10A6NFE3 127 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 SPDYE5A6NIY4 337 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 SLC22A2O15244 555 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 TSPAN9O75954 239 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 SNRPB2P08579 225 aaKnown RBP17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 LRPAP1P30533 357 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 RAB27AP51159 221 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 MTA1Q13330 715 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 SPDYE7PQ495Y7 208 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 ATP6V0D2Q8N8Y2 350 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 FAM172AQ8WUF8 416 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 MBOAT7Q96N66 472 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 RNPEPQ9H4A4 650 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 NID2Q14112 1375 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 CARNS1A5YM72 827 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 CCNB1P14635 433 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 CLCN3P51790 818 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 TDRD10Q5VZ19 366 aaKnown RBP17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 IRF2BP2Q7Z5L9 587 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 STK32CQ86UX6 486 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 EPS8L1Q8TE68 723 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 ZNF606Q8WXB4 792 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 SOCS4Q8WXH5 440 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 ARL8BQ9NVJ2 186 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 MOSPD1Q9UJG1 213 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 USP20Q9Y2K6 914 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 SH3BP1Q9Y3L3 701 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 HDAC3O15379 428 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 CYP1A1P04798 512 aaPredicted RBP17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 HARS2P49590 506 aaKnown RBP17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 ORC1Q13415 861 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 TTC7BQ86TV6 843 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 CYP4Z2PQ8N1L4 340 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 FLCNQ8NFG4 579 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 NBNO60934 754 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 NME5P56597 212 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 ELAVL2Q12926 359 aaKnown RBP17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 KCNMB4Q86W47 210 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 MYDGFQ969H8 173 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 SGF29Q96ES7 293 aa17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 DENND2DQ9H6A0 471 aaPredicted RBP17.81■□□□□ 0.44
PCDHA13-201ENST00000289272 HADHBP55084 474 aaKnown RBP17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 FAM71AQ8IYT1 594 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 PNPLA8Q9NP80 782 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 XPNPEP3Q9NQH7 507 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 FAM198AQ9UFP1 575 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 CYP2F1P24903 491 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 PTPN11Q06124 597 aaPredicted RBP17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 ZCWPW1Q9H0M4 648 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 MAPRE3Q9UPY8 281 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 RNF225M0QZC1 329 aaPredicted RBP17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 BCAT1P54687 386 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 CNPY1Q3B7I2 92 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 KDELC2Q7Z4H8 507 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 PROSER1Q86XN7 944 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 HTR3CQ8WXA8 447 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 TRIM8Q9BZR9 551 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 PTP4A2Q12974 167 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 PTRHD1Q6GMV3 140 aaKnown RBP17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 ZNF276Q8N554 614 aa17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 SEPT5Q99719 369 aaPredicted RBP17.8■□□□□ 0.44
PCDHA13-201ENST00000289272 SPIDRQ14159 915 aa17.79■□□□□ 0.44
PCDHA13-201ENST00000289272 INO80DQ53TQ3 878 aaPredicted RBP17.79■□□□□ 0.44
PCDHA13-201ENST00000289272 HYIQ5T013 277 aa17.79■□□□□ 0.44
PCDHA13-201ENST00000289272 MZT2AQ6P582 158 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms