RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CCDC195A0A1B0GUA6 201 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 LCHNA4D1U4 455 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 MAGEA13PA6NCF6 341 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 RRN3P2A6NIE6 340 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 PIRO00625 290 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 XPO1O14980 1071 aaKnown RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 XPOTO43592 962 aaKnown RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 FAM163BP0C2L3 166 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 KITP10721 976 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 GOT1P17174 413 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 MX2P20592 715 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 AMPD1P23109 780 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 HOXA11P31270 313 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 GNL1P36915 607 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 GP5P40197 560 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 HARS2P49590 506 aaKnown RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 ALDH18A1P54886 795 aaKnown RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 KDSRQ06136 332 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 RCN2Q14257 317 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 FBXO47Q5MNV8 452 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CASC4Q6P4E1 433 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 NOTUMQ6P988 496 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 RIPOR1Q6ZS17 1223 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 BNIPLQ7Z465 357 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 LIMS2Q7Z4I7 341 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CCDC185Q8N715 623 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 TNIP3Q96KP6 325 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CDX2Q99626 313 aaPredicted RBP13.21□□□□□ -0.29
C9orf3-201ENST00000277198 THTPAQ9BU02 230 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 TXNDC16Q9P2K2 825 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 CDY2AQ9Y6F7 541 aa13.21□□□□□ -0.29
C9orf3-201ENST00000277198 VCANP13611 3396 aa13.21□□□□□ -0.3
C9orf3-201ENST00000277198 MYO9BQ13459 2157 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 TPP1O14773 563 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 DAB1O75553 588 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 PROCP04070 461 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 ANPEPP15144 967 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 PRDX6P30041 224 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 AXLP30530 894 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 CPOXP36551 454 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 MAGEA12P43365 314 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 CPA2P48052 419 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 PDE1BQ01064 536 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 PAFAH1B3Q15102 231 aaKnown RBP13.2□□□□□ -0.3
C9orf3-201ENST00000277198 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 TAF2Q6P1X5 1199 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 TMEM154Q6P9G4 183 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 CNKSR3Q6P9H4 555 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 PDZD4Q76G19 769 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-201ENST00000277198 MYLIPQ8WY64 445 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 CMTM5Q96DZ9 223 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 P2RY11Q96G91 374 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 PANX3Q96QZ0 392 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 SLC9A7Q96T83 725 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 BRD8Q9H0E9 1235 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 MTIF3Q9H2K0 278 aaKnown RBP13.2□□□□□ -0.3
C9orf3-201ENST00000277198 ADAMTS10Q9H324 1103 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 ZNF395Q9H8N7 513 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-201ENST00000277198 AGO3Q9H9G7 860 aaKnown RBP13.2□□□□□ -0.3
C9orf3-201ENST00000277198 CDHR5Q9HBB8 845 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 KRT82Q9NSB4 513 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 SNTG2Q9NY99 539 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 COPG2Q9UBF2 871 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 MARCOQ9UEW3 520 aaPredicted RBP13.2□□□□□ -0.3
C9orf3-201ENST00000277198 DNAJC16Q9Y2G8 782 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 ERI2A8K979 691 aaKnown RBP13.2□□□□□ -0.3
C9orf3-201ENST00000277198 RNF103O00237 685 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 NCAM2O15394 837 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 CCNT2O60583 730 aaKnown RBP13.2□□□□□ -0.3
C9orf3-201ENST00000277198 CA3P07451 260 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 PDHA1P08559 390 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 CRABP2P29373 138 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 NOS2P35228 1153 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 LPIN1Q14693 890 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 PCLAFQ15004 111 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 FAM26DQ5JW98 314 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 C1orf146Q5VVC0 180 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 METTL21CQ5VZV1 264 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 HERC6Q8IVU3 1022 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 OR6Y1Q8NGX8 325 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 DTX3LQ8TDB6 740 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 RNF139Q8WU17 664 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 KBTBD7Q8WVZ9 684 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 JADE3Q92613 823 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 GATA6Q92908 595 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 EBF4Q9BQW3 602 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 TRIM56Q9BRZ2 755 aaKnown RBP13.2□□□□□ -0.3
C9orf3-201ENST00000277198 SNX25Q9H3E2 840 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 ZNF576Q9H609 170 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 NDE1Q9NXR1 346 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 TUBGCP4Q9UGJ1 667 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 STAP1Q9ULZ2 295 aa13.2□□□□□ -0.3
C9orf3-201ENST00000277198 TRANK1O15050 2925 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 MAGEB16A2A368 324 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 KPNA7A9QM74 516 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 PPEF2O14830 753 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 H2AFYO75367 372 aaKnown RBP13.19□□□□□ -0.3
C9orf3-201ENST00000277198 LCP1P13796 627 aa13.19□□□□□ -0.3
C9orf3-201ENST00000277198 MGAT1P26572 445 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms