RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 MATN3O15232 486 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 MTSS1O43312 755 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 STC2O76061 302 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 AP2A1O95782 977 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 IVLP07476 585 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 MLNP12872 115 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 CCNB1P14635 433 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 ZXDBP98169 803 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 RFWD3Q6PCD5 774 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 MRRFQ96E11 262 aaKnown RBP12.39□□□□□ -0.43
SDE2-201ENST00000272091 CDK5RAP1Q96SZ6 601 aaKnown RBP12.39□□□□□ -0.43
SDE2-201ENST00000272091 LRRC3Q9BY71 257 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.39□□□□□ -0.43
SDE2-201ENST00000272091 CARNS1A5YM72 827 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 CXorf49A8MYA2 514 aaPredicted RBP12.39□□□□□ -0.43
SDE2-201ENST00000272091 GEMIN4P57678 1058 aaKnown RBP12.39□□□□□ -0.43
SDE2-201ENST00000272091 COG7P83436 770 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 RASA2Q15283 850 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 KBTBD12Q3ZCT8 623 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 NUGGCQ68CJ6 796 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 LRRC31Q6UY01 552 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 RIBC1Q8N443 379 aaPredicted RBP12.39□□□□□ -0.43
SDE2-201ENST00000272091 OR52K2Q8NGK3 314 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 ADAMTS19Q8TE59 1207 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 LRRC39Q96DD0 335 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 PAFAH2Q99487 392 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 VAT1Q99536 393 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 TRPM5Q9NZQ8 1165 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 ZC3H7BQ9UGR2 993 aaKnown RBP12.39□□□□□ -0.43
SDE2-201ENST00000272091 SLC24A2Q9UI40 661 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 H3BNC9 293 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 J3KR12 359 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 ACSL4O60488 711 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 USP12O75317 370 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 HLA-DQB2P05538 268 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 MGAT1P26572 445 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 PHBP35232 272 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 NDST2P52849 883 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 STEAP4Q687X5 459 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 ADGRD1Q6QNK2 874 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 TRABD2AQ86V40 505 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 ATXN2LQ8WWM7 1075 aaKnown RBP12.39□□□□□ -0.43
SDE2-201ENST00000272091 CCDC77Q9BR77 488 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 KIF9Q9HAQ2 790 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 SYBUQ9NX95 663 aa12.39□□□□□ -0.43
SDE2-201ENST00000272091 ARHGAP42A6NI28 874 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 ZNF189O75820 626 aaPredicted RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 KPNA1P52294 538 aaPredicted RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 TRMT10BQ6PF06 316 aaKnown RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 TADA2BQ86TJ2 420 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 CHSY1Q86X52 802 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 TMC8Q8IU68 726 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 OR52K1Q8NGK4 314 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 KLHL5Q96PQ7 755 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 FERMT1Q9BQL6 677 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 ALG13Q9NP73 1137 aaKnown RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 HELZP42694 1942 aaKnown RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 CHD7Q9P2D1 2997 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 HIDE1A8MVS5 230 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 RASA4BC9J798 803 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 RASA4O43374 803 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 GREM1O60565 184 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 CHN1P15882 459 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 PRKCHP24723 683 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 IHHQ14623 411 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 UNC5BQ8IZJ1 945 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 CFAP52Q8N1V2 620 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 SPATA22Q8NHS9 363 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 RPRD1AQ96P16 312 aaPredicted RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 CASS4Q9NQ75 786 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 UBP1Q9NZI7 540 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 MAFFQ9ULX9 164 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 PCDHA11Q9Y5I1 949 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 A0A1W2PPM1 405 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 LSP1P33241 339 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 DENND1CQ8IV53 801 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 HS6ST3Q8IZP7 471 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 LGI2Q8N0V4 545 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 CYP2S1Q96SQ9 504 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 RAD9AQ99638 391 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 SELENOSQ9BQE4 189 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 ZBED2Q9BTP6 218 aa12.38□□□□□ -0.43
SDE2-201ENST00000272091 STMN4Q9H169 189 aaPredicted RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 IPO11Q9UI26 975 aaKnown RBP12.38□□□□□ -0.43
SDE2-201ENST00000272091 UGT1A9O60656 530 aa12.37□□□□□ -0.43
SDE2-201ENST00000272091 FAM155BO75949 473 aa12.37□□□□□ -0.43
SDE2-201ENST00000272091 SESN2P58004 480 aaPredicted RBP12.37□□□□□ -0.43
SDE2-201ENST00000272091 PSRC1Q6PGN9 363 aaPredicted RBP12.37□□□□□ -0.43
SDE2-201ENST00000272091 PLD4Q96BZ4 506 aa12.37□□□□□ -0.43
SDE2-201ENST00000272091 UGT1A7Q9HAW7 530 aa12.37□□□□□ -0.43
SDE2-201ENST00000272091 UGT1A10Q9HAW8 530 aa12.37□□□□□ -0.43
SDE2-201ENST00000272091 UGT1A8Q9HAW9 530 aa12.37□□□□□ -0.43
SDE2-201ENST00000272091 BPTFQ12830 3046 aa12.37□□□□□ -0.43
SDE2-201ENST00000272091 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.37□□□□□ -0.43
SDE2-201ENST00000272091 TRDMT1O14717 391 aaKnown RBP12.37□□□□□ -0.43
SDE2-201ENST00000272091 CXCL14O95715 111 aa12.37□□□□□ -0.43
SDE2-201ENST00000272091 OLFM2O95897 454 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms