RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 DNAJC3Q13217 504 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 MORC3Q14149 939 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 TTC31Q49AM3 519 aaPredicted RBP9.25□□□□□ -0.93
TPM3-201ENST00000271850 KLHL10Q6JEL2 608 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 BEND5Q7L4P6 421 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 TMEM110Q86TL2 294 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 SPATS2Q86XZ4 545 aaKnown RBP9.25□□□□□ -0.93
TPM3-201ENST00000271850 LGI2Q8N0V4 545 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 KDM1BQ8NB78 822 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 HNRNPLLQ8WVV9 542 aaKnown RBP9.25□□□□□ -0.93
TPM3-201ENST00000271850 NELFBQ8WX92 580 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 GOLGA1Q92805 767 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 DHTKD1Q96HY7 919 aaPredicted RBP9.25□□□□□ -0.93
TPM3-201ENST00000271850 TIGD1Q96MW7 591 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 SERPINB11Q96P15 392 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 ELF4Q99607 663 aaPredicted RBP9.25□□□□□ -0.93
TPM3-201ENST00000271850 CDC6Q99741 560 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 DNAI2Q9GZS0 605 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 INTS2Q9H0H0 1204 aaKnown RBP9.25□□□□□ -0.93
TPM3-201ENST00000271850 SUN2Q9UH99 717 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 CTNND2Q9UQB3 1225 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 OR51B4Q9Y5P0 310 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 KALRNO60229 2985 aa9.25□□□□□ -0.93
TPM3-201ENST00000271850 PTPRQQ9UMZ3 2332 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 P4HA2O15460 535 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 LATO43561 262 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 GADD45BO75293 160 aaPredicted RBP9.24□□□□□ -0.93
TPM3-201ENST00000271850 RNASEH2AO75792 299 aaKnown RBP9.24□□□□□ -0.93
TPM3-201ENST00000271850 TRUB2O95900 331 aaKnown RBP9.24□□□□□ -0.93
TPM3-201ENST00000271850 ASLP04424 464 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 SRPRAP08240 638 aaKnown RBP9.24□□□□□ -0.93
TPM3-201ENST00000271850 PDGFRAP16234 1089 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 TFE3P19532 575 aaPredicted RBP9.24□□□□□ -0.93
TPM3-201ENST00000271850 SLC8A1P32418 973 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 GRK6P43250 576 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 ACADVLP49748 655 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 NXPH1P58417 271 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 ECT2LQ008S8 904 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 BNIP3Q12983 259 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 PDCLQ13371 301 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 CDH18Q13634 790 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 E2F5Q15329 346 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 STILQ15468 1287 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 TEAD4Q15561 434 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 CCDC40Q4G0X9 1142 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 SFMBT2Q5VUG0 894 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 DPY19L2P1Q6NXN4 242 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 FOXR2Q6PJQ5 311 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 C14orf80Q86SX3 495 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 ELOA2Q8IYF1 753 aaPredicted RBP9.24□□□□□ -0.93
TPM3-201ENST00000271850 OR2T34Q8NGX1 318 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 ZNF606Q8WXB4 792 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 TSC1Q92574 1164 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 FAM149B1Q96BN6 582 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 SLC2A13Q96QE2 648 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 CPXM1Q96SM3 734 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 ST7Q9NRC1 585 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 FZD4Q9ULV1 537 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 CA5BQ9Y2D0 317 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 ATP6V1DQ9Y5K8 247 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 MGAQ8IWI9 3026 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 CFAP46Q8IYW2 2715 aa9.24□□□□□ -0.93
TPM3-201ENST00000271850 A0A087WV48 116 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 EDDM13A0A1B0GTR0 161 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 TARSL2A2RTX5 802 aaKnown RBP9.23□□□□□ -0.93
TPM3-201ENST00000271850 BIN1O00499 593 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 PSMA7O14818 248 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 TLX3O43711 291 aaPredicted RBP9.23□□□□□ -0.93
TPM3-201ENST00000271850 RTN2O75298 545 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 SMC2O95347 1197 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 CTSLP07711 333 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 GOT1P17174 413 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 EPHA8P29322 1005 aaPredicted RBP9.23□□□□□ -0.93
TPM3-201ENST00000271850 CCR5P51681 352 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 TAS2R38P59533 333 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 ACAP1Q15027 740 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 MEA1Q16626 185 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 AGBL4Q5VU57 503 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 FBXL22Q6P050 247 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 OLFML1Q6UWY5 402 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 CHSY1Q86X52 802 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 IRF2BP1Q8IU81 584 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 ZNF683Q8IZ20 524 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 DEFB106AQ8N104 65 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 CCAR2Q8N163 923 aaKnown RBP9.23□□□□□ -0.93
TPM3-201ENST00000271850 STK32AQ8WU08 396 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 ACE2Q9BYF1 805 aaPredicted RBP9.23□□□□□ -0.93
TPM3-201ENST00000271850 POPDC2Q9HBU9 364 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 SIX2Q9NPC8 291 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 SCML1Q9UN30 329 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 SNX10Q9Y5X0 201 aa9.23□□□□□ -0.93
TPM3-201ENST00000271850 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 ATMQ13315 3056 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 COL27A1Q8IZC6 1860 aaPredicted RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 ENC1O14682 589 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 PLRG1O43660 514 aaKnown RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 GRAP2O75791 330 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 LETM1O95202 739 aaPredicted RBP9.22□□□□□ -0.93
TPM3-201ENST00000271850 MT-CO1P00395 513 aa9.22□□□□□ -0.93
TPM3-201ENST00000271850 AFPP02771 609 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms