RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 CCNB1P14635 433 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 CA4P22748 312 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 GJA8P48165 433 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 ZBTB17Q13105 803 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 PREPLQ4J6C6 727 aaPredicted RBP15.65■□□□□ 0.1
SF3B4-201ENST00000271628 WLSQ5T9L3 541 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 PIK3R6Q5UE93 754 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 TTC39BQ5VTQ0 682 aaPredicted RBP15.65■□□□□ 0.1
SF3B4-201ENST00000271628 PRPF39Q86UA1 669 aaKnown RBP15.65■□□□□ 0.1
SF3B4-201ENST00000271628 C4orf33Q8N1A6 199 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 PPM1NQ8N819 430 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 ZSCAN18Q8TBC5 510 aaPredicted RBP15.65■□□□□ 0.1
SF3B4-201ENST00000271628 DIS3LQ8TF46 1054 aaKnown RBP15.65■□□□□ 0.1
SF3B4-201ENST00000271628 OVCA2Q8WZ82 227 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 TTC17Q96AE7 1141 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 ZNF689Q96CS4 500 aaPredicted RBP15.65■□□□□ 0.1
SF3B4-201ENST00000271628 TGS1Q96RS0 853 aaKnown RBP15.65■□□□□ 0.1
SF3B4-201ENST00000271628 ZYG11BQ9C0D3 744 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 SLC39A8Q9C0K1 460 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 MOCS1Q9NZB8 636 aa15.65■□□□□ 0.1
SF3B4-201ENST00000271628 AFF4Q9UHB7 1163 aaKnown RBP15.65■□□□□ 0.1
SF3B4-201ENST00000271628 AAR2Q9Y312 384 aaKnown RBP15.65■□□□□ 0.1
SF3B4-201ENST00000271628 F5H423 210 aaPredicted RBP15.64■□□□□ 0.09
SF3B4-201ENST00000271628 PIAS1O75925 651 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 ALDH1A2O94788 518 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 MT-ND3P03897 115 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 RHOQP17081 205 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 PGAM1P18669 254 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 DNAJB2P25686 324 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 CD68P34810 354 aaPredicted RBP15.64■□□□□ 0.09
SF3B4-201ENST00000271628 SPARCL1Q14515 664 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 FAM133BQ5BKY9 247 aaKnown RBP15.64■□□□□ 0.09
SF3B4-201ENST00000271628 MS4A13Q5J8X5 152 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 STEAP4Q687X5 459 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 TPGS2Q68CL5 300 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 KCTD11Q693B1 232 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 MIB1Q86YT6 1006 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 ZNF461Q8TAF7 563 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 DENND1AQ8TEH3 1009 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 GIPC2Q8TF65 315 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 CDKL2Q92772 493 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 TMEM169Q96HH4 297 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 KIF9Q9HAQ2 790 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 PLAC1Q9HBJ0 212 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 BFARQ9NZS9 450 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 PRKAG3Q9UGI9 489 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 MAGEB16A2A368 324 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 FAM159BA6NKW6 160 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 CACNG3O60359 315 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 MAFKO60675 156 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 SPAG7O75391 227 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 KRT38O76015 456 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 UBOX5O94941 541 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 ASMTLO95671 621 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 TBX18O95935 607 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 IGLV3-27P01718 113 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 POLBP06746 335 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 ATF6P18850 670 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 NFKB1P19838 968 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 MGAT1P26572 445 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 NDST2P52849 883 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 SESN2P58004 480 aaPredicted RBP15.64■□□□□ 0.09
SF3B4-201ENST00000271628 BNIP1Q12981 228 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 ARTNQ5T4W7 220 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 AFMIDQ63HM1 303 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 FBXO46Q6PJ61 603 aaPredicted RBP15.64■□□□□ 0.09
SF3B4-201ENST00000271628 C14orf80Q86SX3 495 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 LINC00523Q86TU6 105 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 DNAAF3Q8N9W5 541 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 ARNTL2Q8WYA1 636 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 MTBPQ96DY7 904 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 ZNF558Q96NG5 402 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 C11orf49Q9H6J7 331 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 LRRC40Q9H9A6 602 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 RXFP1Q9HBX9 757 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 VANGL2Q9ULK5 521 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 MAGED2Q9UNF1 606 aaPredicted RBP15.64■□□□□ 0.09
SF3B4-201ENST00000271628 SHROOM3Q8TF72 1996 aa15.64■□□□□ 0.09
SF3B4-201ENST00000271628 IGLV3-10A0A075B6K4 115 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 SLC12A8A0AV02 714 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 TLR5O60602 858 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 FAM155BO75949 473 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 ATP6V1G2O95670 118 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 TIMP1P01033 207 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 SNRPAP09012 282 aaKnown RBP15.63■□□□□ 0.09
SF3B4-201ENST00000271628 SEPT7Q16181 437 aaKnown RBP15.63■□□□□ 0.09
SF3B4-201ENST00000271628 ANO4Q32M45 955 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 SNX30Q5VWJ9 437 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 NAPEPLDQ6IQ20 393 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 ZNF449Q6P9G9 518 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 ZNF683Q8IZ20 524 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 UMODL1-AS1Q8N2C9 162 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 GDAP1Q8TB36 358 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 VWCEQ96DN2 955 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 IL12RB2Q99665 862 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 GORASP1Q9BQQ3 440 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 CASS4Q9NQ75 786 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 PRDM5Q9NQX1 630 aaPredicted RBP15.63■□□□□ 0.09
SF3B4-201ENST00000271628 TMEM248Q9NWD8 314 aa15.63■□□□□ 0.09
SF3B4-201ENST00000271628 KLHL14Q9P2G3 628 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms