RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 ZNF286BP0CG31 522 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 SERPINB8P50452 374 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 XIAPP98170 497 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 IFRD2Q12894 506 aaPredicted RBP17.41■□□□□ 0.38
SPG7-201ENST00000268704 CERCAMQ5T4B2 595 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 C6orf52Q5T4I8 152 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 DEFB106AQ8N104 65 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 RNF139Q8WU17 664 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 STK39Q9UEW8 545 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 FZD10Q9ULW2 581 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 NUP205Q92621 2012 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 ZNF487B1APH4 448 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 VILLO15195 856 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 TPH1P17752 444 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 RABGGTBP53611 331 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 LIMK2P53671 638 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 INHBCP55103 352 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 TMEM62Q0P6H9 643 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 VGLL4Q14135 290 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 DCAF6Q58WW2 860 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 GRTP1Q5TC63 336 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 EXOC8Q8IYI6 725 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 DNAAF3Q8N9W5 541 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 PRICKLE1Q96MT3 831 aaPredicted RBP17.41■□□□□ 0.38
SPG7-201ENST00000268704 NMRAL1Q9HBL8 299 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 RHBDL2Q9NX52 303 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 SNTG2Q9NY99 539 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 KLHL8Q9P2G9 620 aaPredicted RBP17.41■□□□□ 0.38
SPG7-201ENST00000268704 LZTS1Q9Y250 596 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 AP4B1Q9Y6B7 739 aa17.41■□□□□ 0.38
SPG7-201ENST00000268704 SHROOM3Q8TF72 1996 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 AVPR1AP37288 418 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 NME3Q13232 169 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 CEACAM7Q14002 265 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 NADK2Q4G0N4 442 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 BHLHE22Q8NFJ8 381 aaPredicted RBP17.4■□□□□ 0.38
SPG7-201ENST00000268704 URGCPQ8TCY9 931 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 BTBD9Q96Q07 612 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 TXNRD2Q9NNW7 524 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.4■□□□□ 0.38
SPG7-201ENST00000268704 UBP1Q9NZI7 540 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 PHGDHO43175 533 aaKnown RBP17.4■□□□□ 0.38
SPG7-201ENST00000268704 TRIM13O60858 407 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 OTUD1Q5VV17 481 aaPredicted RBP17.4■□□□□ 0.38
SPG7-201ENST00000268704 NXNQ6DKJ4 435 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 PTAR1Q7Z6K3 402 aaPredicted RBP17.4■□□□□ 0.38
SPG7-201ENST00000268704 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.4■□□□□ 0.38
SPG7-201ENST00000268704 PIP4K2CQ8TBX8 421 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 SLC2A14Q8TDB8 520 aa17.4■□□□□ 0.38
SPG7-201ENST00000268704 DDX18Q9NVP1 670 aaKnown RBP17.4■□□□□ 0.38
SPG7-201ENST00000268704 ZCWPW2A0A1B0GU75 182 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 FAM72CH0Y354 149 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 PEX1O43933 1283 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 CLPTM1O96005 669 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 ARSAP15289 507 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 RPS12P25398 132 aaKnown RBP17.39■□□□□ 0.38
SPG7-201ENST00000268704 SPRP35270 261 aaPredicted RBP17.39■□□□□ 0.38
SPG7-201ENST00000268704 MAGEA12P43365 314 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 CDKL1Q00532 357 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 MYBPC1Q00872 1141 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 FAM72AQ5TYM5 149 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 FAM219BQ5XKK7 198 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 FAM72DQ6L9T8 149 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 FAM72BQ86X60 149 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 LRGUKQ96M69 825 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 EIF2B3Q9NR50 452 aaKnown RBP17.39■□□□□ 0.38
SPG7-201ENST00000268704 CHRAC1Q9NRG0 131 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 SLC39A10Q9ULF5 831 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 VANGL2Q9ULK5 521 aa17.39■□□□□ 0.38
SPG7-201ENST00000268704 POLR2AP24928 1970 aaKnown RBP17.39■□□□□ 0.37
SPG7-201ENST00000268704 HACD1B0YJ81 288 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 TMEM233B4DJY2 109 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 BST2Q10589 180 aaKnown RBP17.39■□□□□ 0.37
SPG7-201ENST00000268704 FAM187BQ17R55 369 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 ZNF423Q2M1K9 1284 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 SPANXN3Q5MJ09 141 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 BNC2Q6ZN30 1099 aaPredicted RBP17.39■□□□□ 0.37
SPG7-201ENST00000268704 SPATA6LQ8N4H0 392 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 MARVELD2Q8N4S9 558 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 KYQ8NBH2 561 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 HIC2Q96JB3 615 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 PRPF18Q99633 342 aaKnown RBP17.39■□□□□ 0.37
SPG7-201ENST00000268704 NFKBIZQ9BYH8 718 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 TASP1Q9H6P5 420 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 GTF2IRD1Q9UHL9 959 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 ZDHHC2Q9UIJ5 367 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 RIMS3Q9UJD0 308 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 PIGNO95427 931 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 SETSIPP0DME0 302 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 SRGAP2BP0DMP2 458 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 TKTP29401 623 aaKnown RBP17.39■□□□□ 0.37
SPG7-201ENST00000268704 PRDX6P30041 224 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 GRIA4P48058 902 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 ADIGQ0VDE8 80 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 ARL13AQ5H913 290 aaPredicted RBP17.39■□□□□ 0.37
SPG7-201ENST00000268704 CLEC14AQ86T13 490 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 KLHL32Q96NJ5 620 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 PKP2Q99959 881 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 FERMT1Q9BQL6 677 aa17.39■□□□□ 0.37
SPG7-201ENST00000268704 IARS2Q9NSE4 1012 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms