RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 SPAG16Q8N0X2 631 aa12.3□□□□□ -0.44
SRRM4-201ENST00000267260 UBE2E3Q969T4 207 aa12.3□□□□□ -0.44
SRRM4-201ENST00000267260 CDC42EP4Q9H3Q1 356 aaKnown RBP12.3□□□□□ -0.44
SRRM4-201ENST00000267260 DPP7Q9UHL4 492 aa12.3□□□□□ -0.44
SRRM4-201ENST00000267260 SLC12A4Q9UP95 1085 aa12.3□□□□□ -0.44
SRRM4-201ENST00000267260 ZNF37AP17032 561 aaPredicted RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 CCNCP24863 283 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 FXR1P51114 621 aaKnown RBP eCLIP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 ACOX2Q99424 681 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 ATMINO43313 823 aaPredicted RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 RB1P06400 928 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 RPA1P27694 616 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 CLK3P49761 638 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 AP3S2P59780 193 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 S100A12P80511 92 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 STARD3Q14849 445 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 ITIH5Q86UX2 942 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 HPS6Q86YV9 775 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 TSPAN18Q96SJ8 248 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 AK5Q9Y6K8 562 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 NEO1Q92859 1461 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 G3V2T6 193 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 TNNI3P19429 210 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 RPL10AP62906 217 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 NEDD1Q8NHV4 660 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 TMEM159Q96B96 161 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 TDRD3Q9H7E2 651 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 TBC1D24Q9ULP9 559 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 PLA2G4CQ9UP65 541 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 FAM50BQ9Y247 325 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 COL15A1P39059 1388 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 OPLAHO14841 1288 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 SLC25A27O95847 323 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 ETS1P14921 441 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 HOXB8P17481 243 aaPredicted RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 CD151P48509 253 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 CCNG2Q16589 344 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 APOPT1Q96IL0 206 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 IRX2Q9BZI1 471 aaPredicted RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 SLC39A8Q9C0K1 460 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 PRDM16Q9HAZ2 1276 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 MOV10Q9HCE1 1003 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 TLR8Q9NR97 1041 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 RASSF1Q9NS23 344 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 TNPO3Q9Y5L0 923 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 ZCCHC11Q5TAX3 1644 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 HOXA2O43364 376 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 SLC25A12O75746 678 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 CYP7B1O75881 506 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 OR56A5P0C7T3 313 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 DNAJB2P25686 324 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 MAPK10P53779 464 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 NRF1Q16656 503 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 NOA1Q8NC60 698 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 MCOLN3Q8TDD5 553 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 RIT2Q99578 217 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 BHLHE41Q9C0J9 482 aaPredicted RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 QTRT2Q9H974 415 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 LYVE1Q9Y5Y7 322 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 BGNP21810 368 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 POU5F1Q01860 360 aaKnown RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 SNAPC2Q13487 334 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 HIPK1Q86Z02 1210 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 LRRC20Q8TCA0 184 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 GAL3ST3Q96A11 431 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 MTG1Q9BT17 334 aaPredicted RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 FBXO44Q9H4M3 255 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 C3orf18Q9UK00 162 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 SYNPO2Q9UMS6 1093 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 ST3GAL5Q9UNP4 418 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 FRMPD1Q5SYB0 1578 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 UGT1A5P35504 534 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 NPY2RP49146 381 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 PACS1Q6VY07 963 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 STOX1Q6ZVD7 989 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 COLGALT2Q8IYK4 626 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 BHLHE22Q8NFJ8 381 aaPredicted RBP12.29□□□□□ -0.44
SRRM4-201ENST00000267260 MFHAS1Q9Y4C4 1052 aa12.29□□□□□ -0.44
SRRM4-201ENST00000267260 A0A087WZ62 844 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 MYMKA6NI61 221 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 PGRMC2O15173 223 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 KMOO15229 486 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 SERPINA1P01009 418 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 EMC1Q8N766 993 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 SCAIQ8N9R8 606 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 PARK7Q99497 189 aaKnown RBP12.28□□□□□ -0.44
SRRM4-201ENST00000267260 SLC25A23Q9BV35 468 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 CKLFQ9UBR5 152 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 MRPS7Q9Y2R9 242 aaKnown RBP12.28□□□□□ -0.44
SRRM4-201ENST00000267260 MAGI2Q86UL8 1455 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 GPR182O15218 404 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 RGS10O43665 173 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 CCNKO75909 580 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 CYP11B1P15538 503 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 PON1P27169 355 aa12.28□□□□□ -0.44
SRRM4-201ENST00000267260 PBLDP30039 288 aaPredicted RBP12.28□□□□□ -0.44
SRRM4-201ENST00000267260 MARCH10Q8NA82 808 aaPredicted RBP12.28□□□□□ -0.44
SRRM4-201ENST00000267260 MAGEE2Q8TD90 523 aaPredicted RBP12.28□□□□□ -0.44
SRRM4-201ENST00000267260 PNPLA3Q9NST1 481 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms