RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 TNIP3Q96KP6 325 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 ZNF560Q96MR9 790 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 OSMRQ99650 979 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 YIPF3Q9GZM5 350 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 LRRC40Q9H9A6 602 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 SLC24A3Q9HC58 644 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 FLRT1Q9NZU1 646 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 COL4A4P53420 1690 aaPredicted RBP12.72□□□□□ -0.37
BEST3-201ENST00000266661 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.72□□□□□ -0.37
BEST3-201ENST00000266661 M0QYT0 321 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 NRP1O14786 923 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 ZBTB14O43829 449 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 USP1O94782 785 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 NPR3P17342 541 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 ERCC2P18074 760 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 MX2P20592 715 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 ITGAXP20702 1163 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 GLDCP23378 1020 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 GARSP41250 739 aaKnown RBP12.72□□□□□ -0.37
BEST3-201ENST00000266661 COPAP53621 1224 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 AIF1P55008 147 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 LILRA4P59901 499 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 PPIDQ08752 370 aaKnown RBP12.72□□□□□ -0.37
BEST3-201ENST00000266661 IFRD2Q12894 506 aaPredicted RBP12.72□□□□□ -0.37
BEST3-201ENST00000266661 CDC16Q13042 620 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 TRIM32Q13049 653 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 ITGA9Q13797 1035 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 ANKRD20A4Q4UJ75 823 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 MORN1Q5T089 497 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 VWA5B1Q5TIE3 1220 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 PDPK2PQ6A1A2 396 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 FSTL4Q6MZW2 842 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 CLEC20AQ6ZU45 233 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 PID1Q7Z2X4 250 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 RSPH3Q86UC2 560 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 PHTF2Q8N3S3 785 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 POU5F2Q8N7G0 328 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 TMEM40Q8WWA1 233 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 MLPHQ9BV36 600 aaPredicted RBP12.72□□□□□ -0.37
BEST3-201ENST00000266661 OXCT2Q9BYC2 517 aaPredicted RBP12.72□□□□□ -0.37
BEST3-201ENST00000266661 CDH19Q9H159 772 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 VCXQ9H320 206 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 GOLGA2P5Q9HBQ8 144 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 NDE1Q9NXR1 346 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 PTCH2Q9Y6C5 1203 aa12.72□□□□□ -0.37
BEST3-201ENST00000266661 KCNK1O00180 336 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 EEF2KO00418 725 aaKnown RBP12.71□□□□□ -0.37
BEST3-201ENST00000266661 CLDN5O00501 218 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 STRNO43815 780 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 MPOP05164 745 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 PTPN1P18031 435 aaKnown RBP12.71□□□□□ -0.37
BEST3-201ENST00000266661 LRPAP1P30533 357 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 SPRP35270 261 aaPredicted RBP12.71□□□□□ -0.37
BEST3-201ENST00000266661 SERPINB8P50452 374 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 CACNA2D1P54289 1103 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 MXRA7P84157 204 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 DGKDQ16760 1214 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 SV2CQ496J9 727 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 INTS6LQ5JSJ4 861 aaKnown RBP12.71□□□□□ -0.37
BEST3-201ENST00000266661 METTL21CQ5VZV1 264 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 IZUMO2Q6UXV1 221 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 SLC25A41Q8N5S1 370 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.71□□□□□ -0.37
BEST3-201ENST00000266661 ARRDC4Q8NCT1 418 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 CCNYQ8ND76 341 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 MAPK15Q8TD08 544 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 PPP4R1Q8TF05 950 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 STON2Q8WXE9 905 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 AZIN2Q96A70 460 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 FAM149B1Q96BN6 582 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 PGAP3Q96FM1 320 aaPredicted RBP12.71□□□□□ -0.37
BEST3-201ENST00000266661 AGAP2Q99490 1192 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 FAM49AQ9H0Q0 323 aaPredicted RBP12.71□□□□□ -0.37
BEST3-201ENST00000266661 KLK14Q9P0G3 267 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 SRRDQ9UH36 339 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 SCOCQ9UIL1 159 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 TBC1D30Q9Y2I9 924 aa12.71□□□□□ -0.37
BEST3-201ENST00000266661 ZNF638Q14966 1978 aaKnown RBP12.71□□□□□ -0.37
BEST3-201ENST00000266661 TMEM114B3SHH9 223 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 AHCYL1O43865 530 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 CREB3O43889 395 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 SORBS2O94875 1100 aaKnown RBP12.7□□□□□ -0.38
BEST3-201ENST00000266661 LYNP07948 512 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 SBK3P0C264 359 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 IGFBP6P24592 240 aaPredicted RBP12.7□□□□□ -0.38
BEST3-201ENST00000266661 CSE1LP55060 971 aaKnown RBP12.7□□□□□ -0.38
BEST3-201ENST00000266661 GRB14Q14449 540 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 RNF220Q5VTB9 566 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 FRMD7Q6ZUT3 714 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 STRA8Q7Z7C7 330 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 DPP9Q86TI2 863 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 NPWQ8N729 165 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 ZNF781Q8N8C0 355 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 SMG8Q8ND04 991 aaKnown RBP12.7□□□□□ -0.38
BEST3-201ENST00000266661 ACVR1CQ8NER5 493 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 TTC1Q99614 292 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 C1QTNF1Q9BXJ1 281 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 COG4Q9H9E3 785 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 SEPT10Q9P0V9 454 aa12.7□□□□□ -0.38
BEST3-201ENST00000266661 CDH22Q9UJ99 828 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms