RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FEM1AQ9BSK4 669 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 NOL6Q9H6R4 1146 aaKnown RBP18.81■□□□□ 0.6
SDF4-201ENST00000263741 ETNK2Q9NVF9 386 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 VPS28Q9UK41 221 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 KRT86O43790 486 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 SNAP91O60641 907 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 SLU7O95391 586 aaKnown RBP18.81■□□□□ 0.6
SDF4-201ENST00000263741 ERCC2P18074 760 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 AVPR2P30518 371 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 ARL4AP40617 200 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 STK19P49842 368 aaPredicted RBP18.81■□□□□ 0.6
SDF4-201ENST00000263741 C6orf118Q5T5N4 469 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 RHOT1Q8IXI2 618 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 IL17RCQ8NAC3 791 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 TXNDC5Q8NBS9 432 aaKnown RBP18.81■□□□□ 0.6
SDF4-201ENST00000263741 WFIKKN2Q8TEU8 576 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 TSGA10Q9BZW7 698 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 CATSPERBQ9H7T0 1116 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 OR51B4Q9Y5P0 310 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 EML5Q05BV3 1969 aa18.81■□□□□ 0.6
SDF4-201ENST00000263741 SGK1O00141 431 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 POLR2EP19388 210 aaKnown RBP18.8■□□□□ 0.6
SDF4-201ENST00000263741 IL4RP24394 825 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 RPS9P46781 194 aaKnown RBP18.8■□□□□ 0.6
SDF4-201ENST00000263741 DNA2P51530 1060 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 FBXO43Q4G163 708 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 SETD3Q86TU7 594 aaPredicted RBP18.8■□□□□ 0.6
SDF4-201ENST00000263741 TP53INP2Q8IXH6 220 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 CHPFQ8IZ52 775 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 RNF25Q96BH1 459 aaPredicted RBP18.8■□□□□ 0.6
SDF4-201ENST00000263741 RPL10LQ96L21 214 aaKnown RBP18.8■□□□□ 0.6
SDF4-201ENST00000263741 PSMB7Q99436 277 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 SPON2Q9BUD6 331 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 FGF10O15520 208 aaPredicted RBP18.8■□□□□ 0.6
SDF4-201ENST00000263741 ADAM23O75077 832 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 CBX1P83916 185 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 GNA12Q03113 381 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 ZNF234Q14588 700 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 PTPRNQ16849 979 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 NUDT18Q6ZVK8 323 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 ZNF557Q8N988 423 aaPredicted RBP18.8■□□□□ 0.6
SDF4-201ENST00000263741 SPATA6Q9NWH7 488 aaPredicted RBP18.8■□□□□ 0.6
SDF4-201ENST00000263741 OGFRQ9NZT2 677 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 ACTL7AQ9Y615 435 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 RAD54BQ9Y620 910 aa18.8■□□□□ 0.6
SDF4-201ENST00000263741 HLA-EP13747 358 aa18.79■□□□□ 0.6
SDF4-201ENST00000263741 HNRNPLP14866 589 aaKnown RBP eCLIP18.79■□□□□ 0.6
SDF4-201ENST00000263741 IL12RB1P42701 662 aa18.79■□□□□ 0.6
SDF4-201ENST00000263741 MAPKAPK2P49137 400 aa18.79■□□□□ 0.6
SDF4-201ENST00000263741 SATB1Q01826 763 aa18.79■□□□□ 0.6
SDF4-201ENST00000263741 EIF4HQ15056 248 aaKnown RBP18.79■□□□□ 0.6
SDF4-201ENST00000263741 LINGO4Q6UY18 593 aa18.79■□□□□ 0.6
SDF4-201ENST00000263741 NT5DC3Q86UY8 548 aa18.79■□□□□ 0.6
SDF4-201ENST00000263741 FAM71BQ8TC56 605 aa18.79■□□□□ 0.6
SDF4-201ENST00000263741 MTG2Q9H4K7 406 aa18.79■□□□□ 0.6
SDF4-201ENST00000263741 STARD13Q9Y3M8 1113 aa18.79■□□□□ 0.6
SDF4-201ENST00000263741 PSTPIP1O43586 416 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 RAMP2O60895 175 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 MAP3K6O95382 1288 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 KDELR1P24390 212 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 PRKCHP24723 683 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 FNDC3BQ53EP0 1204 aaKnown RBP18.78■□□□□ 0.6
SDF4-201ENST00000263741 LEKR1Q6ZMV7 388 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 ZNF354CQ86Y25 554 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 HMCESQ96FZ2 354 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 KLC2Q9H0B6 622 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 ATP13A1Q9HD20 1204 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 VPS51Q9UID3 782 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 ILVBLA1L0T0 632 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 C3orf70A6NLC5 250 aaPredicted RBP18.78■□□□□ 0.6
SDF4-201ENST00000263741 CBX4O00257 560 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 DCLK1O15075 740 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 KCNA4P22459 653 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 IFI16Q16666 785 aaKnown RBP18.78■□□□□ 0.6
SDF4-201ENST00000263741 LRRC38Q5VT99 294 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 IL31Q6EBC2 164 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 TSSK4Q6SA08 328 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 PEX26Q7Z412 305 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 SYNPOQ8N3V7 929 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 DTWD2Q8NBA8 298 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 PCDH19Q8TAB3 1148 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 TTC17Q96AE7 1141 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 MRGPRX3Q96LB0 322 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 STON1Q9Y6Q2 735 aa18.78■□□□□ 0.6
SDF4-201ENST00000263741 WASH4PA8MWX3 477 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 DLDP09622 509 aaKnown RBP18.77■□□□□ 0.6
SDF4-201ENST00000263741 COL9A1P20849 921 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 HTR7P34969 479 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 MRPS21P82921 87 aaKnown RBP18.77■□□□□ 0.6
SDF4-201ENST00000263741 POLD3Q15054 466 aaPredicted RBP18.77■□□□□ 0.6
SDF4-201ENST00000263741 ANKRD20A8PQ5CZ79 823 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 MFSD7Q6UXD7 560 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 SERPINA13PQ6UXR4 307 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 REXO1L1PQ8IX06 675 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 UCMAQ8WVF2 138 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 ARHGEF2Q92974 986 aaKnown RBP18.77■□□□□ 0.6
SDF4-201ENST00000263741 MYO19Q96H55 970 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 ZNF670Q9BS34 389 aa18.77■□□□□ 0.6
SDF4-201ENST00000263741 THAP10Q9P2Z0 257 aaPredicted RBP18.77■□□□□ 0.6
SDF4-201ENST00000263741 SLCO3A1Q9UIG8 710 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms