RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 RASIP1Q5U651 963 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 PIK3R6Q5UE93 754 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 CNTD1Q8N815 330 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 AZIN2Q96A70 460 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 FCRL3Q96P31 734 aaPredicted RBP13.88□□□□□ -0.19
VMP1-201ENST00000262291 PCMTD2Q9NV79 361 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 ARHGEF38Q9NXL2 777 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.88□□□□□ -0.19
VMP1-201ENST00000262291 TTC24A2A3L6 582 aaPredicted RBP13.88□□□□□ -0.19
VMP1-201ENST00000262291 HMX2A2RU54 273 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 ARHGAP42A6NI28 874 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 GALTP07902 379 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 PRKCHP24723 683 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 AIF1P55008 147 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 ZNF280DQ6N043 979 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 LRRC8BQ6P9F7 803 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 C4orf22Q6V702 233 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 SPATA21Q7Z572 469 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 ARHGAP12Q8IWW6 846 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 PTPRN2Q92932 1015 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 MECRQ9BV79 373 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 ATXN3LQ9H3M9 355 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 PNPLA8Q9NP80 782 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 CDY1Q9Y6F8 540 aa13.88□□□□□ -0.19
VMP1-201ENST00000262291 MTMR11A4FU01 709 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 E9PAM4 449 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 CNTN5O94779 1100 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 HCAR3P49019 387 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 EIF4EBP2Q13542 120 aaPredicted RBP13.87□□□□□ -0.19
VMP1-201ENST00000262291 NFE2Q16621 373 aaPredicted RBP13.87□□□□□ -0.19
VMP1-201ENST00000262291 C10orf120Q5SQS8 335 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 SLC30A9Q6PML9 568 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 LRRC8CQ8TDW0 803 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 DIS3LQ8TF46 1054 aaKnown RBP13.87□□□□□ -0.19
VMP1-201ENST00000262291 ITFG2Q969R8 447 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 RMDN2Q96LZ7 410 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 FRMD8Q9BZ67 464 aaPredicted RBP13.87□□□□□ -0.19
VMP1-201ENST00000262291 PIDD1Q9HB75 910 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 SENP1Q9P0U3 644 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 USP15Q9Y4E8 981 aaPredicted RBP13.87□□□□□ -0.19
VMP1-201ENST00000262291 RPS6KL1Q9Y6S9 549 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 SF3B1O75533 1304 aaKnown RBP eCLIP13.87□□□□□ -0.192e-7■■■■■ 143.6
VMP1-201ENST00000262291 CCDC195A0A1B0GUA6 201 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 TMEM189-UBE2V1I3L0A0 370 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 NEFHP12036 1026 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 TSHRP16473 764 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 TRIM60Q495X7 471 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 TEX44Q53QW1 395 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 ARTNQ5T4W7 220 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 TTC39BQ5VTQ0 682 aaPredicted RBP13.87□□□□□ -0.19
VMP1-201ENST00000262291 ZNF354CQ86Y25 554 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 ATPAF2Q8N5M1 289 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 ANKS4BQ8N8V4 417 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 ZNF75CPQ92670 426 aaPredicted RBP13.87□□□□□ -0.19
VMP1-201ENST00000262291 ZNF669Q96BR6 464 aaPredicted RBP13.87□□□□□ -0.19
VMP1-201ENST00000262291 HDAC11Q96DB2 347 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 CCSER2Q9H7U1 834 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 CORO1CQ9ULV4 474 aaPredicted RBP13.87□□□□□ -0.19
VMP1-201ENST00000262291 PHTF1Q9UMS5 762 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 SCML2Q9UQR0 700 aa13.87□□□□□ -0.19
VMP1-201ENST00000262291 A0A1B0GVG6 124 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 FAM159BA6NKW6 160 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 SPAG6O75602 509 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 CCL5P13501 91 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 MX2P20592 715 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 YWHAQP27348 245 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 SERPINB6P35237 376 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 PGGT1BP53609 377 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 TBX4P57082 545 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 TLE2Q04725 743 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 ALFQ53S48 1182 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 MFSD3Q96ES6 412 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 MYEOVQ96EZ4 313 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 OSBPL1AQ9BXW6 950 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 OSBPL2Q9H1P3 480 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 IGSF9Q9P2J2 1179 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 FETUBQ9UGM5 382 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 BPTFQ12830 3046 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 SCAMP3O14828 347 aaKnown RBP13.86□□□□□ -0.19
VMP1-201ENST00000262291 CSPG5O95196 566 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 GNRH1P01148 92 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 SNRPAP09012 282 aaKnown RBP13.86□□□□□ -0.19
VMP1-201ENST00000262291 MGAT5Q09328 741 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 RASA2Q15283 850 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 RAP1GAP2Q684P5 730 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 RASSF3Q86WH2 238 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 NPAS4Q8IUM7 802 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 SPNS2Q8IVW8 549 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 LRRC39Q96DD0 335 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 ZNF778Q96MU6 729 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 SRPK1Q96SB4 655 aaKnown RBP13.86□□□□□ -0.19
VMP1-201ENST00000262291 GBA3Q9H227 469 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 PPCSQ9HAB8 311 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 CHRAC1Q9NRG0 131 aa13.86□□□□□ -0.19
VMP1-201ENST00000262291 SLC12A8A0AV02 714 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 COPEO14579 308 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 SYN3O14994 580 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 SMIM24O75264 130 aa13.85□□□□□ -0.19
VMP1-201ENST00000262291 RFPL1O75677 317 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms