RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 NR5A2O00482 541 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 CHADO15335 359 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 TRUB2O95900 331 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 PSAPP07602 524 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 PCNAP12004 261 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 SLC7A2P52569 658 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 LRRC38Q5VT99 294 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 SLC4A11Q8NBS3 891 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 MASTLQ96GX5 879 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 SPATA17Q96L03 361 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 B3GNT5Q9BYG0 378 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 TSR3Q9UJK0 312 aaKnown RBP16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 COMMD10Q9Y6G5 202 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 HEATR9A2RTY3 570 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 FUOMA2VDF0 154 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 C7orf72A4D263 438 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 POLBP06746 335 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 OXCT1P55809 520 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 ZBTB17Q13105 803 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 CDKL3Q8IVW4 592 aaPredicted RBP16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 CCDC60Q8IWA6 550 aaPredicted RBP16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 CLEC4FQ8N1N0 589 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 TAMM41Q96BW9 452 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 RNF157Q96PX1 679 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 TMEM39BQ9GZU3 492 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 CCDC68Q9H2F9 335 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 SYBUQ9NX95 663 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 MFHAS1Q9Y4C4 1052 aa16.23■□□□□ 0.19
PRPF40B-201ENST00000261897 KLF11O14901 512 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 BIRC5O15392 142 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 ITGB3P05106 788 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 PORP16435 677 aaPredicted RBP16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 PSMB4P28070 264 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 ATICP31939 592 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 SPRP35270 261 aaPredicted RBP16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 NOMO1Q15155 1222 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 AARS2Q5JTZ9 985 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 SLFN12LQ6IEE8 588 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 DDIASQ8IXT1 998 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 OR9I1Q8NGQ6 314 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 KCTD4Q8WVF5 259 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 BORCS5Q969J3 196 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 SPC25Q9HBM1 224 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 PKD2L2Q9NZM6 624 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 BFARQ9NZS9 450 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 HESX1Q9UBX0 185 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 DCCP43146 1447 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 NEMP2A6NFY4 417 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 GJB1P08034 283 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 GARTP22102 1010 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 CDK9P50750 372 aaKnown RBP16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 FAM47CQ5HY64 1035 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 NAPRTQ6XQN6 538 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 MCF2L2Q86YR7 1114 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 HTRA1Q92743 480 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 CORO1BQ9BR76 489 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 HERC2P3Q9BVR0 1158 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 MAF1Q9H063 256 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 ZDHHC7Q9NXF8 308 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 HMGXB4Q9UGU5 601 aa16.22■□□□□ 0.19
PRPF40B-201ENST00000261897 A6NL46 340 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 E7ENX8 843 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 TFEBP19484 476 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 IREB2P48200 963 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 DGCR6Q14129 220 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 SPPL2CQ8IUH8 684 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 CANT1Q8WVQ1 401 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 PEBP4Q96S96 227 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 SPATA31A5Q5VU36 1347 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 SPATA31A7Q8IWB4 1347 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 IL10P22301 178 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 PAX3P23760 479 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 SLC10A2Q12908 348 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 PPP1R8Q12972 351 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 CAPRIN1Q14444 709 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 KCNJ11Q14654 390 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 IMPG1Q17R60 797 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 DHFR2Q86XF0 187 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 C12orf56Q8IXR9 622 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 C4orf19Q8IY42 314 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 PSD4Q8NDX1 1056 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 INIPQ9NRY2 104 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 HTR3EA5X5Y0 456 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 MATN2O00339 956 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 GNGT2O14610 69 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 TRDMT1O14717 391 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 MRASO14807 208 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 HDAC3O15379 428 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 ATE1O95260 518 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 RPL14P50914 215 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 FASTKQ14296 549 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 GRM2Q14416 872 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 ZC3H7AQ8IWR0 971 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 ARFGAP1Q8N6T3 406 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 CGRRF1Q99675 332 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 DHRS4Q9BTZ2 278 aa16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 SNRNP25Q9BV90 132 aaKnown RBP16.21■□□□□ 0.19
PRPF40B-201ENST00000261897 ACE2Q9BYF1 805 aaPredicted RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms