RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 FAM159BA6NKW6 160 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 ATP6V1G1O75348 118 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 FBXO21O94952 628 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 SRGAP2BP0DMP2 458 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 AKR1A1P14550 325 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 WARSP23381 471 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 SLC1A6P48664 564 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 IDH3AP50213 366 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 HUNKP57058 714 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 MYBPC1Q00872 1141 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 PDPK2PQ6A1A2 396 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 DARS2Q6PI48 645 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 DHRS4L2Q6PKH6 230 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 CYP4V2Q6ZWL3 525 aaPredicted RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 RSPH3Q86UC2 560 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 RASAL3Q86YV0 1011 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 HPS6Q86YV9 775 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 PSTKQ8IV42 348 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 RNF168Q8IYW5 571 aaPredicted RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 POU5F2Q8N7G0 328 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 C7orf31Q8N865 590 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 C12orf29Q8N999 325 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 PPP4R1Q8TF05 950 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 TFB1MQ8WVM0 346 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 RSPH1Q8WYR4 309 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 C18orf25Q96B23 403 aaPredicted RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 RTP4Q96DX8 246 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 LRGUKQ96M69 825 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 ZNF778Q96MU6 729 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 BIRC8Q96P09 236 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 PEBP4Q96S96 227 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 HAUS8Q9BT25 410 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 GRIP2Q9C0E4 1043 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 CDHR5Q9HBB8 845 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 NGRNQ9NPE2 291 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 DDX18Q9NVP1 670 aaKnown RBP11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 STK39Q9UEW8 545 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 SH3GLB1Q9Y371 365 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 AP4B1Q9Y6B7 739 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 CEPT1Q9Y6K0 416 aa11.05□□□□□ -0.64
CHRNA1-201ENST00000261007 TRIP11Q15643 1979 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 SCN1AP35498 2009 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 BCLAF3A2AJT9 711 aaKnown RBP11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 E9PBE3 544 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 H0YJX3 145 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 PAPSS1O43252 624 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 TREHO43280 583 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 GSRP00390 522 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 SERPINE1P05121 402 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 HNRNPCP07910 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 FGF3P11487 239 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 CCDC130P13994 396 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 IDO1P14902 403 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 RGS7P49802 495 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 PPIDQ08752 370 aaKnown RBP11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 ADGRE1Q14246 886 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 FSCN1Q16658 493 aaKnown RBP11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 PRAMEF19Q5SWL8 479 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 UBXN11Q5T124 520 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 METTL21CQ5VZV1 264 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 SLC9A4Q6AI14 798 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 TRNP1Q6NT89 227 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 C17orf99Q6UX52 265 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 STRADAQ7RTN6 431 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 CDKL3Q8IVW4 592 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 ADGRF2Q8IZF7 708 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 BBS5Q8N3I7 341 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 MCUQ8NE86 351 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 FNDC8Q8TC99 324 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 CENPIQ92674 756 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 ZFYVE28Q9HCC9 887 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 PCDH18Q9HCL0 1135 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 FAM49BQ9NUQ9 324 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 FAIMQ9NVQ4 179 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 RCOR3Q9P2K3 495 aaPredicted RBP11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 ZNHIT2Q9UHR6 403 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 NR2E3Q9Y5X4 410 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 TRPM7Q96QT4 1865 aa11.04□□□□□ -0.64
CHRNA1-201ENST00000261007 TMEM221A6NGB7 291 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 H7C0C1 242 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 PPEF2O14830 753 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 XPO1O14980 1071 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 GLRA3O75311 464 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 DUSP11O75319 330 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 IGHA2P01877 340 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 COX4I1P13073 169 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 CDH2P19022 906 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 SLC5A2P31639 672 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 ATP5OP48047 213 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 NR2C2P49116 596 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 BCAR1P56945 870 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 MTM1Q13496 603 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 DPYSL2Q16555 572 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 C15orf59Q2T9L4 293 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 GLRA4Q5JXX5 417 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 SCYL2Q6P3W7 929 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 TAB3Q8N5C8 712 aaPredicted RBP11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 GSDMBQ8TAX9 411 aa11.03□□□□□ -0.64
CHRNA1-201ENST00000261007 KBTBD7Q8WVZ9 684 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms