RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 NPAS3Q8IXF0 933 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 CCDC110Q8TBZ0 833 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 SERPINB12Q96P63 405 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 CERS4Q9HA82 394 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 ARNT2Q9HBZ2 717 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 NDC80O14777 642 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 POLR3GO15318 223 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 ITGAVP06756 1048 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 VDRP11473 427 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 MFAP3P55082 362 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 GNG11P61952 73 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 DMWDQ09019 674 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 USP10Q14694 798 aaKnown RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 TTC30BQ8N4P2 665 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 DEPTORQ8TB45 409 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 PRDM12Q9H4Q4 367 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 PRDM16Q9HAZ2 1276 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 IL23AQ9NPF7 189 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 NRBP2Q9NSY0 501 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 NINJ2Q9NZG7 142 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 UNC13CQ8NB66 2214 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 UNC79Q9P2D8 2635 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 IGKV1-8A0A0C4DH67 115 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 TGM1P22735 817 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 PTPN6P29350 595 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 TNNT3P45378 269 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 C8orf82Q6P1X6 216 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 LEKR1Q6ZMV7 388 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 DPH6Q7L8W6 267 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 NELL2Q99435 816 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 TSG101Q99816 390 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 LATS2Q9NRM7 1088 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 EBF1Q9UH73 591 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 PRG3Q9Y2Y8 225 aaPredicted RBP5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 INSL6Q9Y581 213 aa5.8□□□□□ -1.48
TOPBP1-201ENST00000260810 LY6G6EA0A0G2JKS1 128 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 E9PQ18 207 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 KCNK1O00180 336 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 DNAJB6O75190 326 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 NUDT17P0C025 328 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 GNL1P36915 607 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 VIPR2P41587 438 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 ATP11AP98196 1134 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC9C1Q4G0N8 1177 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 UGT3A1Q6NUS8 523 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PARM1Q6UWI2 310 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 UMODL1-AS1Q8N2C9 162 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 NCAPGQ9BPX3 1015 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 SYT15Q9BQS2 421 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 MIS12Q9H081 205 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 POMKQ9H5K3 350 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 C11orf49Q9H6J7 331 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 CYP3A43Q9HB55 503 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 ZBTB26Q9HCK0 441 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PRSS21Q9Y6M0 314 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 U3KQA8 63 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 RIPK2O43353 540 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 IL18RAPO95256 599 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 EZRP15311 586 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 CAPN2P17655 700 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 OR1D2P34982 312 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PPP1R2P41236 205 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PIK3CAP42336 1068 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 ABCG1P45844 678 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 CYP4F8P98187 520 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 IRF9Q00978 393 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PTSQ03393 145 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PPIDQ08752 370 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 MESDQ14696 234 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 ZKSCAN8Q15776 578 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 VRK3Q8IV63 474 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 TEX37Q96LM6 180 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 KLHDC3Q9BQ90 382 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 ERP44Q9BS26 406 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 SELENOOQ9BVL4 669 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 ETNK1Q9HBU6 452 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 SLC6A13Q9NSD5 602 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PCSK1NQ9UHG2 260 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 EFCAB8A8MWE9 144 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 NOP56O00567 594 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 TLR3O15455 904 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 DNAJC6O75061 913 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 KRT18P05783 430 aaKnown RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 HOXB3P14651 431 aaPredicted RBP5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 TNNI1P19237 187 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 MAGEA11P43364 429 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 TKTL1P51854 596 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 FCHO2Q0JRZ9 810 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 ZNF460Q14592 562 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 EML3Q32P44 896 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 IQCCQ4KMZ1 466 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 CATSPER4Q7RTX7 472 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 NTAN1Q96AB6 310 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PPIL1Q9Y3C6 166 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 WASF2Q9Y6W5 498 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 CCDC189A1A4V9 331 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 TRIM66O15016 1216 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PI15O43692 258 aa5.79□□□□□ -1.48
TOPBP1-201ENST00000260810 PAGE1O75459 146 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms