RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 FEM1AQ9BSK4 669 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 MUC3BQ9H195 1237 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 MAGEH1Q9H213 219 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 SLC2A4RGQ9NR83 387 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 HEBP1Q9NRV9 189 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 KIAA1522Q9P206 1035 aaPredicted RBP16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 GGA2Q9UJY4 613 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 INTS6Q9UL03 887 aaKnown RBP16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 DUSP12Q9UNI6 340 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 VCANP13611 3396 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 CHD5Q8TDI0 1954 aa16.19■□□□□ 0.18
CCDC90B-201ENST00000260054 PABPC1P11940 636 aaKnown RBP16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 PAFAH1B1P43034 410 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 GALNT2Q10471 571 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 B4GALNT4Q76KP1 1039 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 ZC3H18Q86VM9 953 aaKnown RBP16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 PHTF2Q8N3S3 785 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 PRELID2Q8N945 189 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 ZNF557Q8N988 423 aaPredicted RBP16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 TTC13Q8NBP0 860 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 DEC1Q9P2X7 70 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 ARHGAP42A6NI28 874 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 SPECC1L-ADORA2AF8WAN1 911 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 KRIT1O00522 736 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 CTHP32929 405 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 GARSP41250 739 aaKnown RBP16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 OXCT1P55809 520 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 PFKPQ01813 784 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 SERINC3Q13530 473 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 GEN1Q17RS7 908 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 WHAMMP3Q1A5X7 153 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 PLEKHG6Q3KR16 790 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 FUT11Q495W5 492 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 TXNDC11Q6PKC3 985 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 KIAA0907Q7Z7F0 614 aaPredicted RBP16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 RNF135Q8IUD6 432 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 SLC35B2Q8TB61 432 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 LGMNQ99538 433 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 SPON2Q9BUD6 331 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 ACE2Q9BYF1 805 aaPredicted RBP16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 CD320Q9NPF0 282 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 VPS28Q9UK41 221 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 SORCS3Q9UPU3 1222 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 SLC27A6Q9Y2P4 619 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 RAD54BQ9Y620 910 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 PIAS3Q9Y6X2 628 aa16.18■□□□□ 0.18
CCDC90B-201ENST00000260054 NYNRINQ9P2P1 1898 aaKnown RBP16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 MX2P20592 715 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 GLDCP23378 1020 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 ETFBP38117 255 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 EIF2DP41214 584 aaKnown RBP16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 PLK1P53350 603 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 EIF3EP60228 445 aaKnown RBP16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 KDSRQ06136 332 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 SLC12A1Q13621 1099 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 TUBB2AQ13885 445 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 PDK1Q15118 436 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 PITRM1Q5JRX3 1037 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 TMEM215Q68D42 235 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 IL31Q6EBC2 164 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 GRAMD4Q6IC98 578 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 BZW1Q7L1Q6 419 aaKnown RBP16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 ADIPOR2Q86V24 386 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 ZNF354CQ86Y25 554 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 HDAC11Q96DB2 347 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 TUBB2BQ9BVA1 445 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 C10orf88Q9H8K7 445 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 FBRSL1Q9HCM7 1045 aaKnown RBP16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 ATP13A1Q9HD20 1204 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 DNPEPQ9ULA0 475 aa16.17■□□□□ 0.18
CCDC90B-201ENST00000260054 KIAA1549LQ6ZVL6 1849 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 J3KR12 359 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 MCF2LO15068 1137 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 NCAM2O15394 837 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 LIASO43766 372 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 SNAP91O60641 907 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 MAFKO60675 156 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 RBP3P10745 1247 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 SNX1Q13596 522 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 CCNG2Q16589 344 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 SFTPA1Q8IWL2 248 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 GJD3Q8N144 294 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 AHI1Q8N157 1196 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 ATPAF2Q8N5M1 289 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 DCAF4L2Q8NA75 395 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 CCNYQ8ND76 341 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 NECAB3Q96P71 396 aaPredicted RBP16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 IPO11Q9UI26 975 aaKnown RBP16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 F5P12259 2224 aa16.16■□□□□ 0.18
CCDC90B-201ENST00000260054 MIA3Q5JRA6 1907 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 SHISA7A6NL88 538 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 PRRT4C9JH25 899 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 H7C0C1 242 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 CBX4O00257 560 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 PPP1R12AO14974 1030 aaPredicted RBP16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 KDELR3O43731 214 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 ZMPSTE24O75844 475 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 ATP5OP48047 213 aa16.15■□□□□ 0.18
CCDC90B-201ENST00000260054 GALK1P51570 392 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms