RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 TERTO14746 1132 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PER2O15055 1255 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 FOXN1O15353 648 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 KCNQ3O43525 872 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 BUD23O43709 281 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PIAS2O75928 621 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PROS1P07225 676 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 GJA1P17302 382 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RPA1P27694 616 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RPL35P42766 123 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 BMXP51813 675 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 AKR1D1P51857 326 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 YWHAGP61981 247 aaKnown RBP eCLIP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CREMQ03060 361 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 GALNT3Q14435 633 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RTN1Q16799 776 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 MANEAQ5SRI9 462 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RAB12Q6IQ22 244 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TXNDC11Q6PKC3 985 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RNF207Q6ZRF8 634 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 HTR3DQ70Z44 454 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CYB5R4Q7L1T6 521 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RNF180Q86T96 592 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 C10orf53Q8N6V4 93 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PLD5Q8N7P1 536 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 ENGASEQ8NFI3 743 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 GPR156Q8NFN8 814 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 OR56B2PQ8NGI1 322 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TBC1D15Q8TC07 691 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 DEPDC1BQ8WUY9 529 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SCFD1Q8WVM8 642 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TRIB2Q92519 343 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 ATP2A3Q93084 1043 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TIFAQ96CG3 184 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TLCD1Q96CP7 247 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TUBGCP3Q96CW5 907 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RBM4BQ9BQ04 359 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TMEM246Q9BRR3 403 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TRAF4Q9BUZ4 470 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RBM4Q9BWF3 364 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 GPR61Q9BZJ8 451 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SAV1Q9H4B6 383 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CDHR5Q9HBB8 845 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 NDE1Q9NXR1 346 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 APPL1Q9UKG1 709 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SNX24Q9Y343 169 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PCDHGB5Q9Y5G0 923 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SLC12A7Q9Y666 1083 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CSNK1G3Q9Y6M4 447 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 MYH8P13535 1937 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 KIAA1217Q5T5P2 1943 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 KIF20BQ96Q89 1820 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 FOXO6A8MYZ6 492 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 FAM155AB1AL88 458 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 J3KRW8 73 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TRIM16O95361 564 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CD63P08962 238 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CLUP10909 449 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 BMP2P12643 396 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CEBPAP49715 358 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 MEOX2P50222 304 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 SPCS3P61009 180 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 ERVK-8P63133 956 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 PMS2P3Q13401 168 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 MEX3BQ6ZN04 569 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 NIPA1Q7RTP0 329 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 KCNK18Q7Z418 384 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 EFHBQ8N7U6 833 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TTLL6Q8N841 843 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 Q8NFD4 153 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 TCP10LQ8TDR4 215 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 CPT1BQ92523 772 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 NGLY1Q96IV0 654 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 NACC1Q96RE7 527 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 NUDT16L1Q9BRJ7 211 aaKnown RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 MYLK2Q9H1R3 596 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 RANBP3Q9H6Z4 567 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-201ENST00000258733 GGA1Q9UJY5 639 aa7.89□□□□□ -1.15
GPNMB-201ENST00000258733 ASTN2O75129 1339 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 A0A0X1KG70 313 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 TOM1L1O75674 476 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 DGAT1O75907 488 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 HTR3BO95264 441 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 NADKO95544 446 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 QDPRP09417 244 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 CTSHP09668 335 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 ITIH2P19823 946 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 ARNTP27540 789 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 PTPN4P29074 926 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 ADD1P35611 737 aaKnown RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 SLC7A2P52569 658 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 SLC26A5P58743 744 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 EXOSC10Q01780 885 aaKnown RBP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 MFSD13AQ14CX5 517 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 FIGNQ5HY92 759 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.88□□□□□ -1.15
GPNMB-201ENST00000258733 SLFN12LQ6IEE8 588 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 CNNM4Q6P4Q7 775 aa7.88□□□□□ -1.15
GPNMB-201ENST00000258733 RTL4Q6ZR62 310 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms