RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 WASH4PA8MWX3 477 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 POC1B-GALNT4F8VUJ3 575 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 TACR2P21452 398 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 COG7P83436 770 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 CREMQ03060 361 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 STAT4Q14765 748 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 EFTUD2Q15029 972 aaKnown RBP eCLIP19.33■□□□□ 0.686e-7■■■□□ 18.5
TRIM47-201ENST00000254816 RNF187Q5TA31 235 aaPredicted RBP19.33■□□□□ 0.68
TRIM47-201ENST00000254816 AFMIDQ63HM1 303 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 OTUD6BQ8N6M0 293 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 ATP11CQ8NB49 1132 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 SLC22A12Q96S37 553 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 SMPD4Q9NXE4 827 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 SSX2IPQ9Y2D8 614 aa19.33■□□□□ 0.68
TRIM47-201ENST00000254816 EXOC1LA0A1B0GW35 172 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 TRDMT1O14717 391 aaKnown RBP19.32■□□□□ 0.68
TRIM47-201ENST00000254816 OAS1P00973 400 aaKnown RBP19.32■□□□□ 0.68
TRIM47-201ENST00000254816 NFKB1P19838 968 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 CCNCP24863 283 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 GCAP28676 217 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 MICALCLQ6ZW33 695 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 GPR65Q8IYL9 337 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 HS6ST3Q8IZP7 471 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 LGI2Q8N0V4 545 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 ATXN2LQ8WWM7 1075 aaKnown RBP19.32■□□□□ 0.68
TRIM47-201ENST00000254816 CFAP36Q96G28 342 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 ZNF419Q96HQ0 510 aaPredicted RBP19.32■□□□□ 0.68
TRIM47-201ENST00000254816 TRIM56Q9BRZ2 755 aaKnown RBP19.32■□□□□ 0.68
TRIM47-201ENST00000254816 TMEM248Q9NWD8 314 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 LAMA3Q16787 3333 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 LINC01553A4QN01 128 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 GRXCR1A8MXD5 290 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 SCAMP3O14828 347 aaKnown RBP19.32■□□□□ 0.68
TRIM47-201ENST00000254816 ACSL4O60488 711 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 STC2O76061 302 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 F11P03951 625 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 KLKB1P03952 638 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 SF3A3Q12874 501 aaKnown RBP eCLIP19.32■□□□□ 0.681e-6■■■■□ 19.4
TRIM47-201ENST00000254816 FAM133BQ5BKY9 247 aaKnown RBP19.32■□□□□ 0.68
TRIM47-201ENST00000254816 LILRA6Q6PI73 481 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 KLHDC10Q6PID8 442 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 PACS2Q86VP3 889 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 SPATS2Q86XZ4 545 aaKnown RBP19.32■□□□□ 0.68
TRIM47-201ENST00000254816 CYP4X1Q8N118 509 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 CNTD1Q8N815 330 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 PHOSPHO2Q8TCD6 241 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 FBF1Q8TES7 1133 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 POF1BQ8WVV4 589 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 CCDC77Q9BR77 488 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 IL21Q9HBE4 155 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 STK39Q9UEW8 545 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 RABGEF1Q9UJ41 708 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 MYO7AQ13402 2215 aa19.32■□□□□ 0.68
TRIM47-201ENST00000254816 DRGXA6NNA5 263 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 MTSS1O43312 755 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 CCNB1P14635 433 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 DRD4P21917 467 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 HARS2P49590 506 aaKnown RBP19.31■□□□□ 0.68
TRIM47-201ENST00000254816 TXNDC8Q6A555 127 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 OTOP3Q7RTS5 596 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 CPLX4Q7Z7G2 160 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 HMCESQ96FZ2 354 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 TEKT5Q96M29 485 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 TSGA13Q96PP4 275 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 UBP1Q9NZI7 540 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 TTLL3Q9Y4R7 772 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 ARHGAP42A6NI28 874 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 USP12O75317 370 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 ADH1AP07327 375 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 C8AP07357 584 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 CORO1AP31146 461 aaKnown RBP19.31■□□□□ 0.68
TRIM47-201ENST00000254816 MAGEA3P43357 314 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 CYP4F8P98187 520 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 CROCCP2Q86T23 111 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 ITIH5Q86UX2 942 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 SEC16BQ96JE7 1060 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 SIGLEC10Q96LC7 697 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 KLF16Q9BXK1 252 aaPredicted RBP19.31■□□□□ 0.68
TRIM47-201ENST00000254816 FRMD8Q9BZ67 464 aaPredicted RBP19.31■□□□□ 0.68
TRIM47-201ENST00000254816 GBA3Q9H227 469 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 UXTQ9UBK9 157 aaPredicted RBP19.31■□□□□ 0.68
TRIM47-201ENST00000254816 ZNF212Q9UDV6 495 aa19.31■□□□□ 0.68
TRIM47-201ENST00000254816 ATXN2Q99700 1313 aaKnown RBP19.31■□□□□ 0.68
TRIM47-201ENST00000254816 F5H5T6 163 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 NRG2O14511 850 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 TCEA3O75764 348 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 LRG1P02750 347 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 MBL2P11226 248 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 CREB1P16220 341 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 PHBP35232 272 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 IFNAR2P48551 515 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 CRADDP78560 199 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 TNFAIP8L3Q5GJ75 292 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 FAM109BQ6ICB4 259 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 EXOC3L1Q86VI1 746 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 ZNF354CQ86Y25 554 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 UMODL1-AS1Q8N2C9 162 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 ARL14EPQ8N8R7 260 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-201ENST00000254816 KREMEN2Q8NCW0 462 aa19.3■□□□□ 0.68
TRIM47-201ENST00000254816 TTC16Q8NEE8 873 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms