RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 MED21Q13503 144 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 SNX17Q15036 470 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 ANKRD20A4Q4UJ75 823 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 SPANXN3Q5MJ09 141 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 MARCH8Q5T0T0 291 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 C9orf131Q5VYM1 1079 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 PIP4K2CQ8TBX8 421 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 ACMSDQ8TDX5 336 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 EMCNQ9ULC0 261 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 ZNF646O15015 1829 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 MYBPHLA2RUH7 354 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 SNAI1O95863 264 aaPredicted RBP12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 LTFP02788 710 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 AMHP03971 560 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 CCNG1P51959 295 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 ACTR3P61158 418 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 DUSP28Q4G0W2 176 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 SLC9B1Q4ZJI4 515 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 ACAD11Q709F0 780 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 KCTD4Q8WVF5 259 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 ABHD16BQ9H3Z7 469 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 PIDD1Q9HB75 910 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 CHST12Q9NRB3 414 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 IPPQ9Y573 584 aa12.87□□□□□ -0.35
RAB3IP-201ENST00000247833 CAPN14A8MX76 684 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 TRPA1O75762 1119 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 C1QAP02745 245 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 MLNP12872 115 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 PLK1P53350 603 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 SPATA24Q86W54 205 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 SCN4BQ8IWT1 228 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 GDPD5Q8WTR4 605 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 ARNTL2Q8WYA1 636 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 ELMO2Q96JJ3 720 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 ZNF778Q96MU6 729 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 ECSITQ9BQ95 431 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 FAM96AQ9H5X1 160 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 ADA2Q9NZK5 511 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 CPA4Q9UI42 421 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 MEIS3P2A8K0S8 358 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 SNNO75324 88 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 DAB1O75553 588 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 COX4I1P13073 169 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 NMBRP28336 390 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 EPHX2P34913 555 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 FRMD7Q6ZUT3 714 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 SLC41A1Q8IVJ1 513 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 GALNT4Q8N4A0 578 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 FAM136AQ96C01 138 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 LENG8Q96PV6 779 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 ACE2Q9BYF1 805 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 VCX3BQ9H321 246 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 PAPOLBQ9NRJ5 636 aaKnown RBP12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 GJD2Q9UKL4 321 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 LTBP3Q9NS15 1303 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 ADCY6O43306 1168 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 MT-CYBP00156 380 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 GRM3Q14832 879 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 CLEC20AQ6ZU45 233 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 CRYBG2Q8N1P7 616 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 LRGUKQ96M69 825 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 GCNAQ96QF7 691 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 OR52B2Q96RD2 323 aa12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 GATA5Q9BWX5 397 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-201ENST00000247833 BTBD19C9JJ37 291 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 FKBP6O75344 327 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 B3GAT3O94766 335 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 BDNFP23560 247 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 PEX2P28328 305 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 MFSD10Q14728 455 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 CCDC153Q494R4 210 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 TMEM198Q66K66 360 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 SEL1L3Q68CR1 1132 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 LAYNQ6UX15 382 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 TLK2Q86UE8 772 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 ATPAF2Q8N5M1 289 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 CDRT15Q96T59 188 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 RBBP8Q99708 897 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 FICDQ9BVA6 458 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 CDH22Q9UJ99 828 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 TIMM44O43615 452 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 GPC4O75487 556 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 SLC4A1P02730 911 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 GRIA4P48058 902 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 RAP1GDS1P52306 607 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 MRPS22P82650 360 aaKnown RBP12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 CDC16Q13042 620 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 PPM1LQ5SGD2 360 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 DHDDSQ86SQ9 333 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 ST13P4Q8IZP2 240 aaPredicted RBP12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 ICA1LQ8NDH6 482 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 RAB3IL1Q8TBN0 382 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 EBF3Q9H4W6 596 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 PSME4Q14997 1843 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 LIN7AO14910 233 aaPredicted RBP12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 POMCP01189 267 aa12.85□□□□□ -0.35
RAB3IP-201ENST00000247833 GJA5P36382 358 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms