RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 VNN2O95498 520 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 SYF2O95926 243 aaKnown RBP13.55□□□□□ -0.24
SLIRP-201ENST00000238688 GSTA2P09210 222 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 MLNP12872 115 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 ELF1P32519 619 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 CLCN5P51795 746 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 CDR1P51861 262 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 NUBP1P53384 320 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 ATXN1P54253 815 aaKnown RBP13.55□□□□□ -0.24
SLIRP-201ENST00000238688 PITX1P78337 314 aaPredicted RBP13.55□□□□□ -0.24
SLIRP-201ENST00000238688 PPIDQ08752 370 aaKnown RBP13.55□□□□□ -0.24
SLIRP-201ENST00000238688 GALNT2Q10471 571 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 DUSP4Q13115 394 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 STAT4Q14765 748 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 DDR2Q16832 855 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 SLC5A9Q2M3M2 681 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 PABPC1LQ4VXU2 614 aaKnown RBP13.55□□□□□ -0.24
SLIRP-201ENST00000238688 C6orf118Q5T5N4 469 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 C1orf228Q6PIY5 440 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 PARM1Q6UWI2 310 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 NAT8LQ8N9F0 302 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 HTR3CQ8WXA8 447 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 FGF13Q92913 245 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 GDAP1L1Q96MZ0 367 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 SPATA13Q96N96 652 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 TSGA13Q96PP4 275 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 HINFPQ9BQA5 517 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 XAB2Q9HCS7 855 aaKnown RBP13.55□□□□□ -0.24
SLIRP-201ENST00000238688 WNT16Q9UBV4 365 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 CDH7Q9ULB5 785 aa13.55□□□□□ -0.24
SLIRP-201ENST00000238688 MYO18AQ92614 2054 aaKnown RBP13.55□□□□□ -0.24
SLIRP-201ENST00000238688 ANAPC1Q9H1A4 1944 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 NUP205Q92621 2012 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 ZFHX2Q9C0A1 2572 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-201ENST00000238688 USP34Q70CQ2 3546 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 GOLGA6CA6NDK9 693 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 ALOX15BO15296 676 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 CREB3O43889 395 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 RNF40O75150 1001 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 LRIG2O94898 1065 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 LATS1O95835 1130 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 GOLGA6DP0CG33 693 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 SRFP11831 508 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 ERCC2P18074 760 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 AOC1P19801 751 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 AMPD1P23109 780 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 EPHB2P29323 1055 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 PHBP35232 272 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 MLLT6P55198 1093 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-201ENST00000238688 TBX4P57082 545 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 GBE1Q04446 702 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 TAF10Q12962 218 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 KCNJ11Q14654 390 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 TRIP13Q15645 432 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-201ENST00000238688 DNAJC21Q5F1R6 531 aaKnown RBP13.54□□□□□ -0.24
SLIRP-201ENST00000238688 ITPRIPL1Q6GPH6 555 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 TIGD7Q6NT04 549 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-201ENST00000238688 LRRC31Q6UY01 552 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 ARHGEF18Q6ZSZ5 1173 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 ZC3H18Q86VM9 953 aaKnown RBP13.54□□□□□ -0.24
SLIRP-201ENST00000238688 NPAS3Q8IXF0 933 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 CPT1BQ92523 772 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 PLD4Q96BZ4 506 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 SERPINB12Q96P63 405 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 PGLYRP2Q96PD5 576 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 NMUR1Q9HB89 426 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 FAM86C1Q9NVL1 165 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 HAUS2Q9NVX0 235 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 GOLGA6AQ9NYA3 693 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 MARCH2Q9P0N8 246 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 GMIPQ9P107 970 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 SAE1Q9UBE0 346 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-201ENST00000238688 DNMT3LQ9UJW3 386 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 ZFP37Q9Y6Q3 630 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-201ENST00000238688 CHD5Q8TDI0 1954 aa13.54□□□□□ -0.24
SLIRP-201ENST00000238688 MYO15AQ9UKN7 3530 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 DMDP11532 3685 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 IGLV3-10A0A075B6K4 115 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 SYNJ2BP-COX16A0A087WUM0 186 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 SOBPA7XYQ1 873 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 H0Y858 1186 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 PSMD3O43242 534 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 MFSD11O43934 449 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 XYLBO75191 536 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 PAGE1O75459 146 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 RBL1P28749 1068 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 MAGEA4P43358 317 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 VPS41P49754 854 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 EPHB3P54753 998 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 GDF10P55107 478 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 ARPP19P56211 112 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 ZNF844Q08AG5 666 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 NR1H3Q13133 447 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 SEMA5AQ13591 1074 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 PRSS36Q5K4E3 855 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 CEP85LQ5SZL2 805 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 NPNTQ6UXI9 565 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 CCNJLQ8IV13 435 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 SIX5Q8N196 739 aa13.53□□□□□ -0.24
SLIRP-201ENST00000238688 ATP11CQ8NB49 1132 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms