RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 TSGA13Q96PP4 275 aa19.03■□□□□ 0.64
SNX17-201ENST00000233575 EPB41L4BQ9H329 900 aa19.03■□□□□ 0.64
SNX17-201ENST00000233575 KLHL8Q9P2G9 620 aaPredicted RBP19.03■□□□□ 0.64
SNX17-201ENST00000233575 IPO11Q9UI26 975 aaKnown RBP19.03■□□□□ 0.64
SNX17-201ENST00000233575 ARHGAP26Q9UNA1 814 aa19.03■□□□□ 0.64
SNX17-201ENST00000233575 SH3BP1Q9Y3L3 701 aa19.03■□□□□ 0.64
SNX17-201ENST00000233575 EYSQ5T1H1 3165 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 A0A0D9SEW6 157 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 J3KR12 359 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 LINC01565O15544 149 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 ZBTB24O43167 697 aaPredicted RBP19.02■□□□□ 0.64
SNX17-201ENST00000233575 RAMP2O60895 175 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 FGF19O95750 216 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 APRTP07741 180 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 CCNCP24863 283 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 PSMB4P28070 264 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 PMS2P54278 862 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 HP1BP3Q5SSJ5 553 aaPredicted RBP19.02■□□□□ 0.64
SNX17-201ENST00000233575 UBLCP1Q8WVY7 318 aaPredicted RBP19.02■□□□□ 0.64
SNX17-201ENST00000233575 USP13Q92995 863 aaPredicted RBP19.02■□□□□ 0.64
SNX17-201ENST00000233575 BHMTQ93088 406 aa19.02■□□□□ 0.64
SNX17-201ENST00000233575 GFRA2O00451 464 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 ATP8B1O43520 1251 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 OPHN1O60890 802 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 STK10O94804 968 aaKnown RBP19.01■□□□□ 0.63
SNX17-201ENST00000233575 CD68P34810 354 aaPredicted RBP19.01■□□□□ 0.63
SNX17-201ENST00000233575 MAPKAPK2P49137 400 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 CDH4P55283 916 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 ARHGAP15Q53QZ3 475 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 FNBP1LQ5T0N5 605 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 HTR3DQ70Z44 454 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 HOOK3Q86VS8 718 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 CNTD1Q8N815 330 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 LEMD2Q8NC56 503 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 RBM15Q96T37 977 aaKnown RBP eCLIP19.01■□□□□ 0.63
SNX17-201ENST00000233575 GORASP1Q9BQQ3 440 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 PRO3102Q9H379 93 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 LSM7Q9UK45 103 aaKnown RBP19.01■□□□□ 0.63
SNX17-201ENST00000233575 CHD5Q8TDI0 1954 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 CHADO15335 359 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 LATS1O95835 1130 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 PEX11BO96011 259 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 POU2F2P09086 479 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 PFKLP17858 780 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 FASTKD3Q14CZ7 662 aaKnown RBP19.01■□□□□ 0.63
SNX17-201ENST00000233575 POLD3Q15054 466 aaPredicted RBP19.01■□□□□ 0.63
SNX17-201ENST00000233575 MSS51Q4VC12 460 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 TEX44Q53QW1 395 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 TCEAL5Q5H9L2 206 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 FAM217AQ8IXS0 508 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.01■□□□□ 0.63
SNX17-201ENST00000233575 FERMT1Q9BQL6 677 aa19.01■□□□□ 0.63
SNX17-201ENST00000233575 CDC42EP4Q9H3Q1 356 aaKnown RBP19.01■□□□□ 0.63
SNX17-201ENST00000233575 MRPS23Q9Y3D9 190 aaKnown RBP19.01■□□□□ 0.63
SNX17-201ENST00000233575 CCNB1P14635 433 aa19■□□□□ 0.63
SNX17-201ENST00000233575 DDX6P26196 483 aaKnown RBP eCLIP19■□□□□ 0.63
SNX17-201ENST00000233575 FAM193AP78312 1265 aa19■□□□□ 0.63
SNX17-201ENST00000233575 ZNF33AQ06730 810 aa19■□□□□ 0.63
SNX17-201ENST00000233575 HYAL1Q12794 435 aa19■□□□□ 0.63
SNX17-201ENST00000233575 RARS2Q5T160 578 aaKnown RBP19■□□□□ 0.63
SNX17-201ENST00000233575 ELMSAN1Q6PJG2 1045 aa19■□□□□ 0.63
SNX17-201ENST00000233575 LEKR1Q6ZMV7 388 aa19■□□□□ 0.63
SNX17-201ENST00000233575 ZNF354CQ86Y25 554 aa19■□□□□ 0.63
SNX17-201ENST00000233575 OR7D4Q8NG98 312 aa19■□□□□ 0.63
SNX17-201ENST00000233575 ZIM3Q96PE6 472 aa19■□□□□ 0.63
SNX17-201ENST00000233575 DDX50Q9BQ39 737 aaKnown RBP19■□□□□ 0.63
SNX17-201ENST00000233575 SFXN1Q9H9B4 322 aa19■□□□□ 0.63
SNX17-201ENST00000233575 DONSONQ9NYP3 566 aa19■□□□□ 0.63
SNX17-201ENST00000233575 SPTBN5Q9NRC6 3674 aaKnown RBP19■□□□□ 0.63
SNX17-201ENST00000233575 A0A1B0GVM2 712 aa19■□□□□ 0.63
SNX17-201ENST00000233575 TCAF2A6NFQ2 919 aa19■□□□□ 0.63
SNX17-201ENST00000233575 ARHGAP42A6NI28 874 aa19■□□□□ 0.63
SNX17-201ENST00000233575 AGPSO00116 658 aa19■□□□□ 0.63
SNX17-201ENST00000233575 MATN3O15232 486 aa19■□□□□ 0.63
SNX17-201ENST00000233575 TBL1XO60907 577 aa19■□□□□ 0.63
SNX17-201ENST00000233575 AVILO75366 819 aa19■□□□□ 0.63
SNX17-201ENST00000233575 CLDN11O75508 207 aa19■□□□□ 0.63
SNX17-201ENST00000233575 GRIA1P42261 906 aa19■□□□□ 0.63
SNX17-201ENST00000233575 MAGEA6P43360 314 aa19■□□□□ 0.63
SNX17-201ENST00000233575 SEMA5AQ13591 1074 aa19■□□□□ 0.63
SNX17-201ENST00000233575 SLMAPQ14BN4 828 aa19■□□□□ 0.63
SNX17-201ENST00000233575 IQCKQ8N0W5 287 aa19■□□□□ 0.63
SNX17-201ENST00000233575 OR2W6PQ8NHA6 318 aa19■□□□□ 0.63
SNX17-201ENST00000233575 C9orf72Q96LT7 481 aa19■□□□□ 0.63
SNX17-201ENST00000233575 TEKT5Q96M29 485 aa19■□□□□ 0.63
SNX17-201ENST00000233575 VIPAS39Q9H9C1 493 aa19■□□□□ 0.63
SNX17-201ENST00000233575 TDP1Q9NUW8 608 aa19■□□□□ 0.63
SNX17-201ENST00000233575 MTSS1O43312 755 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 NFKB1P19838 968 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 IFI35P80217 286 aaPredicted RBP18.99■□□□□ 0.63
SNX17-201ENST00000233575 SERINC3Q13530 473 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 HIF1AQ16665 826 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 PARP15Q460N3 678 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 FSCBQ5H9T9 825 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 CXorf57Q6NSI4 855 aaKnown RBP18.99■□□□□ 0.63
SNX17-201ENST00000233575 C4orf22Q6V702 233 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 CHST9Q7L1S5 443 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 OTOP3Q7RTS5 596 aa18.99■□□□□ 0.63
SNX17-201ENST00000233575 PDCD7Q8N8D1 485 aaKnown RBP18.99■□□□□ 0.63
SNX17-201ENST00000233575 UHMK1Q8TAS1 419 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms