RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 NIPA2Q8N8Q9 360 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 IL17RCQ8NAC3 791 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 KDM1BQ8NB78 822 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 EZH1Q92800 747 aaPredicted RBP11.6□□□□□ -0.55
SF3B6-201ENST00000233468 IGSF8Q969P0 613 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 TBC1D31Q96DN5 1066 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 BAG1Q99933 345 aaPredicted RBP11.6□□□□□ -0.55
SF3B6-201ENST00000233468 CATSPERBQ9H7T0 1116 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 SPTLC3Q9NUV7 552 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 THAP10Q9P2Z0 257 aaPredicted RBP11.6□□□□□ -0.55
SF3B6-201ENST00000233468 RAB23Q9ULC3 237 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 CLEC4EQ9ULY5 219 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 NENFQ9UMX5 172 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 TBC1D30Q9Y2I9 924 aa11.6□□□□□ -0.55
SF3B6-201ENST00000233468 FGF10O15520 208 aaPredicted RBP11.59□□□□□ -0.55
SF3B6-201ENST00000233468 RHOCP08134 193 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 SRPRAP08240 638 aaKnown RBP11.59□□□□□ -0.55
SF3B6-201ENST00000233468 HOXB2P14652 356 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 RHOQP17081 205 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 OR1E1P30953 314 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 CD70P32970 193 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 ARHGAP25P42331 645 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 PXNP49023 591 aaPredicted RBP11.59□□□□□ -0.55
SF3B6-201ENST00000233468 MAPKAPK2P49137 400 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 PLK1P53350 603 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 OGDHQ02218 1023 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 LMAN2Q12907 356 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 BYSLQ13895 437 aaKnown RBP11.59□□□□□ -0.55
SF3B6-201ENST00000233468 CCDC6Q16204 474 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 CRY1Q16526 586 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 FNDC3BQ53EP0 1204 aaKnown RBP11.59□□□□□ -0.55
SF3B6-201ENST00000233468 PITRM1Q5JRX3 1037 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 EMC10Q5UCC4 262 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 SERPINA13PQ6UXR4 307 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 C14orf80Q86SX3 495 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 LAPTM4BQ86VI4 370 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 LONP2Q86WA8 852 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 DNAAF5Q86Y56 855 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 CCDC33Q8N5R6 958 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 CCDC185Q8N715 623 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 SPC24Q8NBT2 197 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 TTC17Q96AE7 1141 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 RTKNQ9BST9 563 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 C2orf49Q9BVC5 232 aaPredicted RBP11.59□□□□□ -0.55
SF3B6-201ENST00000233468 MUC3BQ9H195 1237 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 FBRSQ9HAH7 460 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 SEMA4GQ9NTN9 838 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 SUN2Q9UH99 717 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 VPS28Q9UK41 221 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 FZD10Q9ULW2 581 aa11.59□□□□□ -0.55
SF3B6-201ENST00000233468 EPN1Q9Y6I3 576 aaPredicted RBP11.59□□□□□ -0.55
SF3B6-201ENST00000233468 ILVBLA1L0T0 632 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 DAPK3O43293 454 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 CREB3O43889 395 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 LRCH4O75427 683 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 LRIG2O94898 1065 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 LCA5LO95447 670 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 RETP07949 1114 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 SDHBP21912 280 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 FECHP22830 423 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 EPHB2P29323 1055 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 MIPP30301 263 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 MAN1A1P33908 653 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 CSKP41240 450 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 SSR1P43307 286 aaKnown RBP11.58□□□□□ -0.56
SF3B6-201ENST00000233468 ECT2LQ008S8 904 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 MESP2Q0VG99 397 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 PLEKHG6Q3KR16 790 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 EGFLAMQ63HQ2 1017 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 ADIPOR2Q86V24 386 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 C11orf74Q86VG3 221 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 ZNF683Q8IZ20 524 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 FAM160A2Q8N612 972 aaPredicted RBP11.58□□□□□ -0.56
SF3B6-201ENST00000233468 RFFLQ8WZ73 363 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 ARHGEF26Q96DR7 871 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 MYEOVQ96EZ4 313 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 P2RY11Q96G91 374 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 GABRG3Q99928 467 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 FEM1AQ9BSK4 669 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 ZWILCHQ9H900 591 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 GRPEL1Q9HAV7 217 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 ANLNQ9NQW6 1124 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 RXFP3Q9NSD7 469 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 BCCIPQ9P287 314 aaKnown RBP eCLIP11.58□□□□□ -0.56
SF3B6-201ENST00000233468 EBF1Q9UH73 591 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 PCSK1NQ9UHG2 260 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 SLC25A13Q9UJS0 675 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 AP4E1Q9UPM8 1137 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 PCDHA13Q9Y5I0 950 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 STON1Q9Y6Q2 735 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 HELZP42694 1942 aaKnown RBP11.58□□□□□ -0.56
SF3B6-201ENST00000233468 KIAA1549LQ6ZVL6 1849 aa11.58□□□□□ -0.56
SF3B6-201ENST00000233468 USP24Q9UPU5 2620 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 CXorf51AA0A1B0GTR3 108 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 I6L893 689 aaPredicted RBP11.57□□□□□ -0.56
SF3B6-201ENST00000233468 SGK1O00141 431 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 EEF2KO00418 725 aaKnown RBP11.57□□□□□ -0.56
SF3B6-201ENST00000233468 PROSCO94903 275 aa11.57□□□□□ -0.56
SF3B6-201ENST00000233468 NDUFA10O95299 355 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms