RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 PROSER1Q86XN7 944 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 CDK20Q8IZL9 346 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 PRELID2Q8N945 189 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 TRPV1Q8NER1 839 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 CELF1Q92879 486 aaKnown RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 MMP19Q99542 508 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 COMMD9Q9P000 198 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 USP21Q9UK80 565 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 PEX16Q9Y5Y5 336 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 C19orf81C9J6K1 198 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 SERPINA1P01009 418 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 EIF4BP23588 611 aaKnown RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 SYNE4Q8N205 404 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 FICDQ9BVA6 458 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 CLCA2Q9UQC9 943 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 BMP10O95393 424 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 ITGAXP20702 1163 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 PLET1Q6UQ28 207 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 SV2AQ7L0J3 742 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 APOBEC3FQ8IUX4 373 aaKnown RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 GTF3C2Q8WUA4 911 aaPredicted RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 SLITRK1Q96PX8 696 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 CISHQ9NSE2 258 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 PIN4Q9Y237 131 aaKnown RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 INVSQ9Y283 1065 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 DNAJA2O60884 412 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 UGT2B11O75310 529 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 CCNKO75909 580 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 S100A6P06703 90 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 MCFD2Q8NI22 146 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 ZNF671Q8TAW3 534 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 TAS1R2Q8TE23 839 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 A0A1W2PRG6 482 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 RBAK-RBAKDNI3L0D1 243 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 NADKO95544 446 aaPredicted RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 NPTX2P47972 431 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 ZFAND2BQ8WV99 257 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 RXFP2Q8WXD0 754 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 BAP1Q92560 729 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 CDK5RAP1Q96SZ6 601 aaKnown RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 SLC4A5Q9BY07 1137 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 DPP3Q9NY33 737 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 LOC110117498-PIK3R3F6TDL0 507 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 RGS14O43566 566 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 CPB1P15086 417 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 GSTM5P46439 218 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 KPNA1P52294 538 aaPredicted RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 ZNF470Q6ECI4 717 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 C16orf62Q7Z3J2 963 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 POLNQ7Z5Q5 900 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 ACSF2Q96CM8 615 aaPredicted RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 RERGLQ9H628 205 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 DPYSL4O14531 572 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 VAPBO95292 243 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 ALDH1A1P00352 501 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 TCF4P15884 667 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 CSNK2BP67870 215 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 GRIK3Q13003 919 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 PYDC2Q56P42 97 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 TP53INP1Q96A56 240 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 EPB41L1Q9H4G0 881 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 FRMPD1Q5SYB0 1578 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 ALOX15BO15296 676 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 COPZ1P61923 177 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 STK40Q8N2I9 435 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 ZNF540Q8NDQ6 660 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 TSEN34Q9BSV6 310 aaKnown RBP8.35□□□□□ -1.07
APOB-201ENST00000233242 EFR3BQ9Y2G0 817 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 PCDHA11Q9Y5I1 949 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 KIAA1210Q9ULL0 1709 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 MLYCDO95822 493 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 RNF220Q5VTB9 566 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 CRTC3Q6UUV7 619 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 FBXO33Q7Z6M2 555 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 RNF148Q8N7C7 305 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 POMKQ9H5K3 350 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 LGALS13Q9UHV8 139 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 DSEQ9UL01 958 aa8.35□□□□□ -1.07
APOB-201ENST00000233242 ODC1P11926 461 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 SLC11A2P49281 568 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 CAMK2GQ13555 558 aaPredicted RBP8.34□□□□□ -1.07
APOB-201ENST00000233242 SLC44A2Q8IWA5 706 aaPredicted RBP8.34□□□□□ -1.07
APOB-201ENST00000233242 SP8Q8IXZ3 490 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 DYRK1BQ9Y463 629 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 ECE2O60344 883 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 JCHAINP01591 159 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 LTA4HP09960 611 aaKnown RBP8.34□□□□□ -1.07
APOB-201ENST00000233242 MZF1P28698 734 aaPredicted RBP8.34□□□□□ -1.07
APOB-201ENST00000233242 STARP49675 285 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 CDK9P50750 372 aaKnown RBP8.34□□□□□ -1.07
APOB-201ENST00000233242 ZNF549Q6P9A3 640 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 PEG10Q86TG7 708 aaKnown RBP8.34□□□□□ -1.07
APOB-201ENST00000233242 HOPXQ9BPY8 73 aaPredicted RBP8.34□□□□□ -1.07
APOB-201ENST00000233242 SLC12A4Q9UP95 1085 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 CNPP09543 421 aaKnown RBP8.34□□□□□ -1.07
APOB-201ENST00000233242 SEC23AQ15436 765 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 CHMP1BQ7LBR1 199 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 AHI1Q8N157 1196 aa8.34□□□□□ -1.07
APOB-201ENST00000233242 RASGEF1CQ8N431 466 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms