RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 RAD54BQ9Y620 910 aa16.63■□□□□ 0.25
LTBR-201ENST00000228918 A0A096LPK6 155 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 SMIM35A0A1B0GVV1 85 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 PDE5AO76074 875 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 MPOP05164 745 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 FYNP06241 537 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 SMIM10L2AP0DMW4 78 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 SMIM10L2BP0DMW5 78 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 NCF2P19878 526 aaPredicted RBP16.62■□□□□ 0.25
LTBR-201ENST00000228918 PRDX6P30041 224 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 AIF1P55008 147 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 IRF9Q00978 393 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 PPIDQ08752 370 aaKnown RBP16.62■□□□□ 0.25
LTBR-201ENST00000228918 SCAPQ12770 1279 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 USP4Q13107 963 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 ANKRD20A4Q4UJ75 823 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 UBXN11Q5T124 520 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 PDZD4Q76G19 769 aaPredicted RBP16.62■□□□□ 0.25
LTBR-201ENST00000228918 JADE3Q92613 823 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 TSPAN18Q96SJ8 248 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 COG4Q9H9E3 785 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 WDR6Q9NNW5 1121 aaKnown RBP16.62■□□□□ 0.25
LTBR-201ENST00000228918 SHROOM3Q8TF72 1996 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 TMEM114B3SHH9 223 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 I6L893 689 aaPredicted RBP16.62■□□□□ 0.25
LTBR-201ENST00000228918 NRP1O14786 923 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 SORBS2O94875 1100 aaKnown RBP16.62■□□□□ 0.25
LTBR-201ENST00000228918 HSPA4LO95757 839 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 UBTFL6P0CB48 400 aaPredicted RBP16.62■□□□□ 0.25
LTBR-201ENST00000228918 CYP2C9P11712 490 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 PTPN1P18031 435 aaKnown RBP16.62■□□□□ 0.25
LTBR-201ENST00000228918 CYP2B6P20813 491 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 TKTL1P51854 596 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 RNF111Q6ZNA4 994 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 FRMD7Q6ZUT3 714 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 DNAAF3Q8N9W5 541 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 SLC7A14Q8TBB6 771 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 MLPHQ9BV36 600 aaPredicted RBP16.62■□□□□ 0.25
LTBR-201ENST00000228918 GBA3Q9H227 469 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 CAB39LQ9H9S4 337 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 CYP4F11Q9HBI6 524 aa16.62■□□□□ 0.25
LTBR-201ENST00000228918 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.61■□□□□ 0.25
LTBR-201ENST00000228918 MBLAC1A4D2B0 266 aaPredicted RBP16.61■□□□□ 0.25
LTBR-201ENST00000228918 ERI2A8K979 691 aaKnown RBP16.61■□□□□ 0.25
LTBR-201ENST00000228918 ZBTB24O43167 697 aaPredicted RBP16.61■□□□□ 0.25
LTBR-201ENST00000228918 DCXO43602 365 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 ZBTB14O43829 449 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 AMHP03971 560 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 LYNP07948 512 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 CD68P34810 354 aaPredicted RBP16.61■□□□□ 0.25
LTBR-201ENST00000228918 ABCG1P45844 678 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 TPI1P60174 286 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 DLG2Q15700 870 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 SLC9B1Q4ZJI4 515 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 HSP90AA5PQ58FG0 334 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 FSCBQ5H9T9 825 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 FOXB2Q5VYV0 432 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 DEFB107AQ8IZN7 70 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 NPWQ8N729 165 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 MFSD3Q96ES6 412 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 TRAPPC9Q96Q05 1148 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 MCMBPQ9BTE3 642 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 PDP2Q9P2J9 529 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 UNCXA6NJT0 531 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 NCAM2O15394 837 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 STRNO43815 780 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 C2P06681 752 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 COX4I1P13073 169 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 CSE1LP55060 971 aaKnown RBP16.61■□□□□ 0.25
LTBR-201ENST00000228918 PEX6Q13608 980 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 CUL3Q13618 768 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 HNRNPDQ14103 355 aaKnown RBP16.61■□□□□ 0.25
LTBR-201ENST00000228918 SNX17Q15036 470 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 PDCD2Q16342 344 aaPredicted RBP16.61■□□□□ 0.25
LTBR-201ENST00000228918 CFAP157Q5JU67 520 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 KCNMB4Q86W47 210 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 ADAM32Q8TC27 787 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 URGCPQ8TCY9 931 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 MAPK15Q8TD08 544 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 SLC26A7Q8TE54 656 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 PPP2R3CQ969Q6 453 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 CCDC124Q96CT7 223 aaKnown RBP16.61■□□□□ 0.25
LTBR-201ENST00000228918 MAML3Q96JK9 1138 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 ULBP1Q9BZM6 244 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 ZDHHC7Q9NXF8 308 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 POMPQ9Y244 141 aa16.61■□□□□ 0.25
LTBR-201ENST00000228918 LOC100653049A0A140TA62 436 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 E9PBE3 544 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 TIMM44O43615 452 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 KLHL41O60662 606 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 KRT34O76011 436 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 NUMBP49757 651 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 MAP3K7CLP57077 242 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 ASPHQ12797 758 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 ZBTB17Q13105 803 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 KLF10Q13118 480 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 MPP3Q13368 585 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 CERCAMQ5T4B2 595 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 PDSS2Q86YH6 399 aa16.6■□□□□ 0.25
LTBR-201ENST00000228918 ARRDC4Q8NCT1 418 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms