RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PRKD2Q9BZL6 878 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 POLR1BQ9H9Y6 1135 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 POPDC2Q9HBU9 364 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 ANAPC2Q9UJX6 822 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 AKAP3O75969 853 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 EPN2O95208 641 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 MAPTP10636 758 aaKnown RBP13.46□□□□□ -0.25
COL1A1-201ENST00000225964 GZMAP12544 262 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 SLC44A4Q53GD3 710 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 ZBTB49Q6ZSB9 765 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 GAD1Q99259 594 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 SIKE1Q9BRV8 207 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 ARIH1Q9Y4X5 557 aaPredicted RBP13.46□□□□□ -0.25
COL1A1-201ENST00000225964 PNPLA6Q8IY17 1366 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 RECQL4O94761 1208 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 SCNN1GP51170 649 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 LZTR1Q8N653 840 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 NSMCE2Q96MF7 247 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 UROC1Q96N76 676 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 C10orf88Q9H8K7 445 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 BPIFA1Q9NP55 256 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 SPATA2Q9UM82 520 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 LYVE1Q9Y5Y7 322 aa13.46□□□□□ -0.25
COL1A1-201ENST00000225964 MYL12BO14950 172 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 GNRH1P01148 92 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 LGALS2P05162 132 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 NQO1P15559 274 aaKnown RBP13.46□□□□□ -0.26
COL1A1-201ENST00000225964 DGKAP23743 735 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 RPA3P35244 121 aaPredicted RBP13.46□□□□□ -0.26
COL1A1-201ENST00000225964 RAD23AP54725 363 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 ZNF268Q14587 947 aaPredicted RBP13.46□□□□□ -0.26
COL1A1-201ENST00000225964 GPAT3Q53EU6 434 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 EFCAB3Q8N7B9 438 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 TMBIM4Q9HC24 238 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 GNPTGQ9UJJ9 305 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 INPP4BO15327 924 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 CRATP43155 626 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 SNAP47Q5SQN1 464 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 OTUD3Q5T2D3 398 aaPredicted RBP13.46□□□□□ -0.26
COL1A1-201ENST00000225964 PACS1Q6VY07 963 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 TMEM86AQ8N2M4 240 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 HELQQ8TDG4 1101 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 SENP8Q96LD8 212 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 ULBP1Q9BZM6 244 aa13.46□□□□□ -0.26
COL1A1-201ENST00000225964 FASP25445 335 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 TCHHL1Q5QJ38 904 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-201ENST00000225964 DEFB107AQ8IZN7 70 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 PCDH9Q9HC56 1237 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 CROTQ9UKG9 612 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 GSAPA4D1B5 854 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 SLC25A12O75746 678 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 TSPAN19P0C672 248 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 SLC4A5Q9BY07 1137 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 ZNF232Q9UNY5 417 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 RIMS1Q86UR5 1692 aaKnown RBP13.45□□□□□ -0.26
COL1A1-201ENST00000225964 BCORL1Q5H9F3 1711 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 CENPXA8MT69 81 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 HACD1B0YJ81 288 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 TLL1O43897 1013 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 IL1BP01584 269 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 EPORP19235 508 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 ELK3P41970 407 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 PLK1P53350 603 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 MRPS6P82932 125 aaKnown RBP13.45□□□□□ -0.26
COL1A1-201ENST00000225964 PTSQ03393 145 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 SRSF11Q05519 484 aaKnown RBP13.45□□□□□ -0.26
COL1A1-201ENST00000225964 CDC73Q6P1J9 531 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 SERPINA13PQ6UXR4 307 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 ZNF606Q8WXB4 792 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 ZBTB45Q96K62 511 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-201ENST00000225964 TBCDQ9BTW9 1192 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 TCF7L2Q9NQB0 619 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 SETBP1Q9Y6X0 1596 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 E9PCH4 1651 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 ACADSP16219 412 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 VGLL4Q14135 290 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 ZSWIM7Q19AV6 140 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 KDM7AQ6ZMT4 941 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 SLC41A1Q8IVJ1 513 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 SNRNP27Q8WVK2 155 aaKnown RBP13.45□□□□□ -0.26
COL1A1-201ENST00000225964 STARD8Q92502 1023 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 FAM50BQ9Y247 325 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 VPS4BO75351 444 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 PPATQ06203 517 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 OR10G6Q8NH81 332 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 ACTL9Q8TC94 416 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 MYOCQ99972 504 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 NOD2Q9HC29 1040 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 PCDHB9Q9Y5E1 797 aa13.45□□□□□ -0.26
COL1A1-201ENST00000225964 WNT10BO00744 389 aa13.44□□□□□ -0.26
COL1A1-201ENST00000225964 HOXC6P09630 235 aa13.44□□□□□ -0.26
COL1A1-201ENST00000225964 S100A3P33764 101 aa13.44□□□□□ -0.26
COL1A1-201ENST00000225964 CD86P42081 329 aa13.44□□□□□ -0.26
COL1A1-201ENST00000225964 SERPINH1P50454 418 aaKnown RBP13.44□□□□□ -0.26
COL1A1-201ENST00000225964 KLHL23Q8NBE8 558 aa13.44□□□□□ -0.26
COL1A1-201ENST00000225964 ACTRT1Q8TDG2 376 aa13.44□□□□□ -0.26
COL1A1-201ENST00000225964 KIFC1Q9BW19 673 aa13.44□□□□□ -0.26
COL1A1-201ENST00000225964 KLHL31Q9H511 634 aa13.44□□□□□ -0.26
COL1A1-201ENST00000225964 SLC24A2Q9UI40 661 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms