RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 RASA4BC9J798 803 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 RGS16O15492 202 aaPredicted RBP17.17■□□□□ 0.34
TVP23C-201ENST00000225576 RASA4O43374 803 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 CACNG3O60359 315 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 AVILO75366 819 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 SPAG6O75602 509 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 PFKLP17858 780 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 GABRR2P28476 465 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 CDC25CP30307 473 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 GYS2P54840 703 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 LONRF1Q17RB8 773 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 ANO4Q32M45 955 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 PARP15Q460N3 678 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 TNFAIP8L3Q5GJ75 292 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 RABGAP1LQ5R372 815 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 PPM1LQ5SGD2 360 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 ADGRF1Q5T601 910 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 LRRC8BQ6P9F7 803 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 C3orf62Q6ZUJ4 267 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 KLHDC8BQ8IXV7 354 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 SH2D3CQ8N5H7 860 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 CNTD1Q8N815 330 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 PDCD7Q8N8D1 485 aaKnown RBP17.17■□□□□ 0.34
TVP23C-201ENST00000225576 MICAL1Q8TDZ2 1067 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 MYEOVQ96EZ4 313 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 ZFRQ96KR1 1074 aaKnown RBP17.17■□□□□ 0.34
TVP23C-201ENST00000225576 AGAP3Q96P47 875 aa17.17■□□□□ 0.34
TVP23C-201ENST00000225576 STMN4Q9H169 189 aaPredicted RBP17.17■□□□□ 0.34
TVP23C-201ENST00000225576 BCCIPQ9P287 314 aaKnown RBP eCLIP17.17■□□□□ 0.34
TVP23C-201ENST00000225576 GRM6O15303 877 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 PSMD3O43242 534 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 SUN1O94901 812 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 ARHGEF15O94989 841 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 AP2A1O95782 977 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 AGTP01019 485 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 MYOGP15173 224 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 HDCP19113 662 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 CDH4P55283 916 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 GABPB1Q06547 395 aaPredicted RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 CAMK1Q14012 370 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 PRPSAP1Q14558 356 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 KCTD11Q693B1 232 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 TXNDC8Q6A555 127 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 PDE12Q6L8Q7 609 aaKnown RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 IGDCC3Q8IVU1 814 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 HS6ST3Q8IZP7 471 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 ARL14EPQ8N8R7 260 aaPredicted RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 HMCESQ96FZ2 354 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 SIGLEC10Q96LC7 697 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 CYP2S1Q96SQ9 504 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 GORASP1Q9BQQ3 440 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 TRPC7Q9HCX4 862 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 FETUBQ9UGM5 382 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 AGO1Q9UL18 857 aaKnown RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 NOVA2Q9UNW9 492 aaKnown RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 CHMP2BQ9UQN3 213 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 RAMP2O60895 175 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 GSTA2P09210 222 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 NFKB1P19838 968 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 SSTR1P30872 391 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 OR1E1P30953 314 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 MMP13P45452 471 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 SLCO1A2P46721 670 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 IFNAR2P48551 515 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 SLC7A9P82251 487 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 SMAD3P84022 425 aaKnown RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 MTM1Q13496 603 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 HNRNPDQ14103 355 aaKnown RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 POLD3Q15054 466 aaPredicted RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 RFWD3Q6PCD5 774 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 TDRPQ86YL5 185 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 AGGF1Q8N302 714 aaeCLIP17.16■□□□□ 0.346e-16■■□□□ 11.4
TVP23C-201ENST00000225576 RIBC1Q8N443 379 aaPredicted RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 PPP1R2P1Q96PQ5 205 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 FCRL5Q96RD9 977 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 TGS1Q96RS0 853 aaKnown RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 SLC22A12Q96S37 553 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 LGALS13Q9UHV8 139 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 RABGEF1Q9UJ41 708 aa17.16■□□□□ 0.34
TVP23C-201ENST00000225576 ZFP37Q9Y6Q3 630 aaPredicted RBP17.16■□□□□ 0.34
TVP23C-201ENST00000225576 EXOC1LA0A1B0GW35 172 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 SMIM23A6NLE4 172 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 GRXCR1A8MXD5 290 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 F5H423 210 aaPredicted RBP17.15■□□□□ 0.34
TVP23C-201ENST00000225576 CDH16O75309 829 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 CLDN11O75508 207 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 FGF19O95750 216 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 PEX11BO96011 259 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 NR1D1P20393 614 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 HOXA9P31269 272 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 GRIA1P42261 906 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 RENBPP51606 427 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 EPHA5P54756 1037 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 ERVK-21P61565 698 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 RASA2Q15283 850 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 CHST9Q7L1S5 443 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 SPRED2Q7Z698 418 aa17.15■□□□□ 0.34
TVP23C-201ENST00000225576 CIR1Q86X95 450 aaPredicted RBP17.15■□□□□ 0.34
TVP23C-201ENST00000225576 ADAMTS19Q8TE59 1207 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms