RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ZW10O43264 779 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 ACRP10323 421 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 LAG3P18627 525 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 PSMA4P25789 261 aaKnown RBP18.77■□□□□ 0.6
CLIP2-201ENST00000223398 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.77■□□□□ 0.6
CLIP2-201ENST00000223398 VAT1Q99536 393 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 NMRAL1Q9HBL8 299 aa18.77■□□□□ 0.6
CLIP2-201ENST00000223398 SMIM28A0A1B0GU29 152 aa18.77■□□□□ 0.59
CLIP2-201ENST00000223398 MSI1O43347 362 aaKnown RBP18.77■□□□□ 0.59
CLIP2-201ENST00000223398 CCNB1P14635 433 aa18.77■□□□□ 0.59
CLIP2-201ENST00000223398 SLC45A4Q5BKX6 768 aa18.77■□□□□ 0.59
CLIP2-201ENST00000223398 DEPDC1Q5TB30 811 aa18.77■□□□□ 0.59
CLIP2-201ENST00000223398 VN1R5Q7Z5H4 357 aa18.77■□□□□ 0.59
CLIP2-201ENST00000223398 FNDC5Q8NAU1 212 aa18.77■□□□□ 0.59
CLIP2-201ENST00000223398 VAV3Q9UKW4 847 aa18.77■□□□□ 0.59
CLIP2-201ENST00000223398 C16orf96A6NNT2 1141 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 WASP42768 502 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 RPAINQ86UA6 219 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 TMEM120AQ9BXJ8 343 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 ATP13A3Q9H7F0 1226 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 HAO1Q9UJM8 370 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 UBDO15205 165 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 CLK2P49760 499 aaKnown RBP18.76■□□□□ 0.59
CLIP2-201ENST00000223398 PARP6Q2NL67 630 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 GRAMD4Q6IC98 578 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 CPNE1Q99829 537 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 TMBIM4Q9HC24 238 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 TRMT13Q9NUP7 481 aaKnown RBP18.76■□□□□ 0.59
CLIP2-201ENST00000223398 MDM4O15151 490 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 ZNF23P17027 643 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 GUCA1AP43080 201 aaPredicted RBP18.76■□□□□ 0.59
CLIP2-201ENST00000223398 RRP1BQ14684 758 aaKnown RBP18.76■□□□□ 0.59
CLIP2-201ENST00000223398 KATNAL2Q8IYT4 538 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 CAMKK1Q8N5S9 505 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 SMG7Q92540 1137 aaKnown RBP18.76■□□□□ 0.59
CLIP2-201ENST00000223398 TMPRSS4Q9NRS4 437 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 USE1Q9NZ43 259 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 TMEM114B3SHH9 223 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 NUDT14O95848 222 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 DNAJC14Q6Y2X3 702 aaPredicted RBP18.76■□□□□ 0.59
CLIP2-201ENST00000223398 CEP68Q76N32 757 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.76■□□□□ 0.596e-8■■■□□ 16.2
CLIP2-201ENST00000223398 TMCC3Q9ULS5 477 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 UBXN8O00124 270 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 RIPK2O43353 540 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 MRPS5P82675 430 aaKnown RBP18.76■□□□□ 0.59
CLIP2-201ENST00000223398 CRHR2Q13324 411 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 IYDQ6PHW0 289 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 LRRC55Q6ZSA7 311 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 ARNTL2Q8WYA1 636 aa18.76■□□□□ 0.59
CLIP2-201ENST00000223398 FAM120BQ96EK7 910 aaKnown RBP18.76■□□□□ 0.59
CLIP2-201ENST00000223398 A0A1W2PQH9 124 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 OR6C75A6NL08 312 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 AOC2O75106 756 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 CRABP2P29373 138 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 ZACNQ401N2 412 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 PSTKQ8IV42 348 aaKnown RBP18.75■□□□□ 0.59
CLIP2-201ENST00000223398 RIN3Q8TB24 985 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 LNX1Q8TBB1 728 aaPredicted RBP18.75■□□□□ 0.59
CLIP2-201ENST00000223398 MYCBPQ99417 103 aaPredicted RBP18.75■□□□□ 0.59
CLIP2-201ENST00000223398 TLR10Q9BXR5 811 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 CCDC134Q9H6E4 229 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 C1orf232A0A0U1RR37 186 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 EPHB6O15197 1021 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 TAF10Q12962 218 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 FBXW10Q5XX13 1052 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 BBS4Q96RK4 519 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 DUSP16Q9BY84 665 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 SPATS2LQ9NUQ6 558 aaKnown RBP18.75■□□□□ 0.59
CLIP2-201ENST00000223398 GALNT3Q14435 633 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 PLD3Q8IV08 490 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 FAM9CQ8IZT9 166 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 TOP6BLQ8N6T0 577 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 RERGLQ9H628 205 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 FBXO6Q9NRD1 293 aaPredicted RBP18.75■□□□□ 0.59
CLIP2-201ENST00000223398 PTCH2Q9Y6C5 1203 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 MED1Q15648 1581 aaPredicted RBP18.75■□□□□ 0.59
CLIP2-201ENST00000223398 RRM2P31350 389 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 RPL7AP62424 266 aaKnown RBP18.75■□□□□ 0.59
CLIP2-201ENST00000223398 FAAP100Q0VG06 881 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 NEPROQ6NW34 567 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 FAM71AQ8IYT1 594 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 TADA1Q96BN2 335 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 CXorf40BQ96DE9 158 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 B3GNT5Q9BYG0 378 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 NDEL1Q9GZM8 345 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 NINJ2Q9NZG7 142 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 COL20A1Q9P218 1284 aa18.75■□□□□ 0.59
CLIP2-201ENST00000223398 COL1A2P08123 1366 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 CYP2C18P33260 490 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 SLC1A6P48664 564 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 CHRNB3Q05901 458 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 ING5Q8WYH8 240 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 NDRG1Q92597 394 aaKnown RBP18.74■□□□□ 0.59
CLIP2-201ENST00000223398 POMKQ9H5K3 350 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 POLG2Q9UHN1 485 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 SOWAHBA6NEL2 793 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 ALBP02768 609 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 ATP6V1B2P21281 511 aa18.74■□□□□ 0.59
CLIP2-201ENST00000223398 GRK2P25098 689 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms