RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 KRT87PA6NCN2 255 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 RAD51BO15315 384 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 CBX6O95503 412 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 VCLP18206 1134 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 ATP6V1B2P21281 511 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 PSMB4P28070 264 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 PGS1Q32NB8 556 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 NPNTQ6UXI9 565 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 IZUMO2Q6UXV1 221 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 GLT6D1Q7Z4J2 308 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 TRIM69Q86WT6 500 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 PHACTR4Q8IZ21 702 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 TMEM159Q96B96 161 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 TADA1Q96BN2 335 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 SH3GL3Q99963 347 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 ST6GALNAC4Q9H4F1 302 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 COPS7BQ9H9Q2 264 aaPredicted RBP11.72□□□□□ -0.53
NOD1-201ENST00000222823 PLCH1Q4KWH8 1693 aa11.72□□□□□ -0.53
NOD1-201ENST00000222823 FSCN2O14926 492 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 B4GALT5O43286 388 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 KATNA1O75449 491 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 ZNF682O95780 498 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 PGK1P00558 417 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 RAD23AP54725 363 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 UBE3AQ05086 875 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 SFSWAPQ12872 951 aaKnown RBP11.71□□□□□ -0.53
NOD1-201ENST00000222823 NAB1Q13506 487 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 RNF148Q8N7C7 305 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 OR52K1Q8NGK4 314 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 RIN3Q8TB24 985 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 NRDE2Q9H7Z3 1164 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 CDHR5Q9HBB8 845 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 CROTQ9UKG9 612 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 TMCC3Q9ULS5 477 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 CACNA1SQ13698 1873 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 MYO5AQ9Y4I1 1855 aaKnown RBP11.71□□□□□ -0.53
NOD1-201ENST00000222823 GJB1P08034 283 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 ALADP13716 330 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 KLRC2P26717 231 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 ABCG1P45844 678 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 NAGLUP54802 743 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 NUP107P57740 925 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 INHBEP58166 350 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 PCBP1Q15365 356 aaKnown RBP eCLIP11.71□□□□□ -0.53
NOD1-201ENST00000222823 RIPOR1Q6ZS17 1223 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 POLNQ7Z5Q5 900 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 FAM84AQ96KN4 292 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 TMEM237Q96Q45 408 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 PIF1Q9H611 641 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 CRYL1Q9Y2S2 319 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 SPACA6W5XKT8 324 aa11.71□□□□□ -0.53
NOD1-201ENST00000222823 ATXN2Q99700 1313 aaKnown RBP11.71□□□□□ -0.53
NOD1-201ENST00000222823 PIGNO95427 931 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 SHBGP04278 402 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 ATP5C1P36542 298 aaKnown RBP11.71□□□□□ -0.54
NOD1-201ENST00000222823 SERPINH1P50454 418 aaKnown RBP11.71□□□□□ -0.54
NOD1-201ENST00000222823 DGKZQ13574 1117 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 BOP1Q14137 746 aaKnown RBP11.71□□□□□ -0.54
NOD1-201ENST00000222823 SCARA3Q6AZY7 606 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 SYTL1Q8IYJ3 562 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 FNDC5Q8NAU1 212 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 SEMA4DQ92854 862 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 ZFYVE19Q96K21 471 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 NSMCE2Q96MF7 247 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 CAPN10Q9HC96 672 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 NDUFAF1Q9Y375 327 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 ATRNL1Q5VV63 1379 aa11.71□□□□□ -0.54
NOD1-201ENST00000222823 SLC15A5A6NIM6 579 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 OPLAHO14841 1288 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 SYNCRIPO60506 623 aaKnown RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 SMIM10L2AP0DMW4 78 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 SMIM10L2BP0DMW5 78 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 CKBP12277 381 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 RPA3P35244 121 aaPredicted RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 FLT3P36888 993 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 RFX3P48380 749 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 HADHBP55084 474 aaKnown RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 CRADDP78560 199 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 BCL2L1Q07817 233 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 FASTKQ14296 549 aaKnown RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 WASHC2DQ5SRD0 308 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 UNC5AQ6ZN44 842 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 MOB2Q70IA6 237 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 FAM126BQ8IXS8 530 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 CKAP2Q8WWK9 683 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ART4Q93070 314 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 KLHL4Q9C0H6 718 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 PTPRHQ9HD43 1115 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 AP4S1Q9Y587 144 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 FGF10O15520 208 aaPredicted RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 MSH3P20585 1137 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 CHI3L1P36222 383 aaPredicted RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 MRPS15P82914 257 aaKnown RBP11.7□□□□□ -0.54
NOD1-201ENST00000222823 TBCELQ5QJ74 424 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 ALLCQ8N6M5 410 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 MCOLN3Q8TDD5 553 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 VPS33AQ96AX1 596 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 KLRG1Q96E93 195 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 MFSD14AQ96MC6 490 aa11.7□□□□□ -0.54
NOD1-201ENST00000222823 TMEM39AQ9NV64 488 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms