RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SH3TC2Q8TF17 1288 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 NT5C3BQ969T7 300 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 WDR55Q9H6Y2 383 aaPredicted RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 STX18Q9P2W9 335 aaKnown RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 GTF2IRD1Q9UHL9 959 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 GNEQ9Y223 722 aaKnown RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 MAP3K7O43318 606 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 C2P06681 752 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 CHRNGP07510 517 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 UBTFL6P0CB48 400 aaPredicted RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 GCKP35557 465 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 GARSP41250 739 aaKnown RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 SLC9B1Q4ZJI4 515 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 C6orf163Q5TEZ5 329 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 ZNF467Q7Z7K2 595 aaPredicted RBP14.94□□□□□ -0.02
CNOT3-201ENST00000221232 SLC26A7Q8TE54 656 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 APBB2Q92870 758 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 COLEC11Q9BWP8 271 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 COG4Q9H9E3 785 aa14.94□□□□□ -0.02
CNOT3-201ENST00000221232 A0A088AWK7 358 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 ZCWPW2A0A1B0GU75 182 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 MAP3K13O43283 966 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 TOMM70O94826 608 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 LRIG2O94898 1065 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 POMCP01189 267 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 LINGO3P0C6S8 592 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 HOXD8P13378 290 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-201ENST00000221232 ANPEPP15144 967 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 MX2P20592 715 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 SPRP35270 261 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-201ENST00000221232 MSX2P35548 267 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-201ENST00000221232 SCNN1GP51170 649 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 CUL3Q13618 768 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 KCNMB4Q86W47 210 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 TOP6BLQ8N6T0 577 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 RNF217Q8TC41 542 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 MAPK15Q8TD08 544 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 SCYL1Q96KG9 808 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 RBBP8Q99708 897 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 CPNE1Q99829 537 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 FBXW11Q9UKB1 542 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 TRIP12Q14669 1992 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-201ENST00000221232 ZNF638Q14966 1978 aaKnown RBP14.93□□□□□ -0.02
CNOT3-201ENST00000221232 C17orf102A2RUQ5 167 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 ENO4A6NNW6 628 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 AP2A1O95782 977 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 SERPINB5P36952 375 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 SCNN1AP37088 669 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 KLC1Q07866 573 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 ITGA7Q13683 1181 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 POU6F1Q14863 301 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 SPANXN3Q5MJ09 141 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 GRTP1Q5TC63 336 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 SCAMP5Q8TAC9 235 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 URGCPQ8TCY9 931 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 ACMSDQ8TDX5 336 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 ZC3H15Q8WU90 426 aaKnown RBP14.93□□□□□ -0.02
CNOT3-201ENST00000221232 SLC2A13Q96QE2 648 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 IGSF9Q9P2J2 1179 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 RCOR3Q9P2K3 495 aaPredicted RBP14.93□□□□□ -0.02
CNOT3-201ENST00000221232 SOX13Q9UN79 622 aa14.93□□□□□ -0.02
CNOT3-201ENST00000221232 RPL26L1Q9UNX3 145 aaKnown RBP14.93□□□□□ -0.02
CNOT3-201ENST00000221232 TK2O00142 265 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 MAGEC1O60732 1142 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 CPOXP36551 454 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 BRCC3P46736 316 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 RAP1GDS1P52306 607 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 ATXN3P54252 364 aaPredicted RBP14.92□□□□□ -0.02
CNOT3-201ENST00000221232 CDC42EP1Q00587 391 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 CBLBQ13191 982 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 CTBP1Q13363 440 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 MPP3Q13368 585 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 DEFB107AQ8IZN7 70 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 SGF29Q96ES7 293 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 TMEM209Q96SK2 561 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 MMADHCQ9H3L0 296 aaPredicted RBP14.92□□□□□ -0.02
CNOT3-201ENST00000221232 TASP1Q9H6P5 420 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 ST3GAL5Q9UNP4 418 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 ZCCHC18P0CG32 403 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 ACADSP16219 412 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 COPAP53621 1224 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 CRYBB1P53674 252 aaPredicted RBP14.92□□□□□ -0.02
CNOT3-201ENST00000221232 GRM3Q14832 879 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 RABGAP1LQ5R372 815 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 CYS1Q717R9 158 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 HPS6Q86YV9 775 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 IPMKQ8NFU5 416 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 MARK4Q96L34 752 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 OR52B2Q96RD2 323 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 OMDQ99983 421 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 DNAI2Q9GZS0 605 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 EIF2B3Q9NR50 452 aaKnown RBP14.92□□□□□ -0.02
CNOT3-201ENST00000221232 INPP5FQ9Y2H2 1132 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 BPTFQ12830 3046 aa14.92□□□□□ -0.02
CNOT3-201ENST00000221232 MYADML2A6NDP7 307 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 SKIP12755 728 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 MPSTP25325 297 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 AXLP30530 894 aa14.91□□□□□ -0.02
CNOT3-201ENST00000221232 FAM219BQ5XKK7 198 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms