RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ALPK1Q96QP1 1244 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 INO80BQ9C086 356 aaPredicted RBP13.92□□□□□ -0.18
GABPB1-201ENST00000220429 KCNK4Q9NYG8 393 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 SPEF1Q9Y4P9 236 aa13.92□□□□□ -0.18
GABPB1-201ENST00000220429 PRR5-ARHGAP8B1AHC4 643 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 SLC25A27O95847 323 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 CST3P01034 146 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-201ENST00000220429 KRT6AP02538 564 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 KRT6BP04259 564 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 BMPR1AP36894 532 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 ZNF135P52742 658 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-201ENST00000220429 EFNA5P52803 228 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 ARHGAP8P85298 464 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 GNA12Q03113 381 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 CDK18Q07002 472 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 LAMTOR4Q0VGL1 99 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 RALGPS1Q5JS13 557 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 FGD3Q5JSP0 725 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 PPM1LQ5SGD2 360 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 CELF3Q5SZQ8 465 aaKnown RBP13.91□□□□□ -0.18
GABPB1-201ENST00000220429 AGAP9Q5VTM2 703 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 ANKRD26P1Q6NSI1 321 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 RALGPS2Q86X27 583 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-201ENST00000220429 DCP2Q8IU60 420 aaKnown RBP13.91□□□□□ -0.18
GABPB1-201ENST00000220429 NLRP7Q8WX94 980 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 DPF3Q92784 378 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 PSKH2Q96QS6 385 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 ACO2Q99798 780 aaKnown RBP13.91□□□□□ -0.18
GABPB1-201ENST00000220429 C11orf70Q9BRQ4 267 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 MRPL4Q9BYD3 311 aaKnown RBP13.91□□□□□ -0.18
GABPB1-201ENST00000220429 AGTPBP1Q9UPW5 1226 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 MYRFQ9Y2G1 1151 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 IGKV6-21A0A0C4DH24 114 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 H3BMQ9 156 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 H3BNH8 94 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 FSCN2O14926 492 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 SCO2O43819 266 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 TOM1L1O75674 476 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 KLHL2O95198 593 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 ATF2P15336 505 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 TBXAS1P24557 533 aaPredicted RBP13.91□□□□□ -0.18
GABPB1-201ENST00000220429 MAGEA4P43358 317 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 DGKDQ16760 1214 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 TICAM1Q8IUC6 712 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 ANKRD13AQ8IZ07 590 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 TTC30BQ8N4P2 665 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 UBR7Q8N806 425 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 RNF149Q8NC42 400 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 ADCY4Q8NFM4 1077 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 TCP10LQ8TDR4 215 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 TANKQ92844 425 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 NLRP4Q96MN2 994 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 COG8Q96MW5 612 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 ADAM33Q9BZ11 813 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 CDH22Q9UJ99 828 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 KCNH4Q9UQ05 1017 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 RNF11Q9Y3C5 154 aa13.91□□□□□ -0.18
GABPB1-201ENST00000220429 GOLGA8QA0A0J9YX86 632 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 GOLGA8OA6NCC3 632 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 GOLGA8NF8WBI6 632 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 GOLGA8RI6L899 631 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 TM9SF1O15321 606 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 NAGAP17050 411 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 M6PRP20645 277 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 ADCY8P40145 1251 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 GNG2P59768 71 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 NIPAL4Q0D2K0 466 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 LYSMD3Q7Z3D4 306 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 FBXO16Q8IX29 292 aaPredicted RBP13.9□□□□□ -0.18
GABPB1-201ENST00000220429 CLIP4Q8N3C7 705 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 COPS5Q92905 334 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 GCOM2Q9BZD3 368 aaPredicted RBP13.9□□□□□ -0.18
GABPB1-201ENST00000220429 C12orf65Q9H3J6 166 aaKnown RBP13.9□□□□□ -0.18
GABPB1-201ENST00000220429 RNF181Q9P0P0 153 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 PPME1Q9Y570 386 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 DNAJC25-GNG10A0A024R161 153 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 NOP56O00567 594 aaKnown RBP13.9□□□□□ -0.18
GABPB1-201ENST00000220429 PRKCBP05771 671 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 FOSL1P15407 271 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 GABRB3P28472 473 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 ARL1P40616 181 aaPredicted RBP13.9□□□□□ -0.18
GABPB1-201ENST00000220429 NR4A2P43354 598 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 NKX2-5P52952 324 aaPredicted RBP13.9□□□□□ -0.18
GABPB1-201ENST00000220429 BASP1P80723 227 aaKnown RBP13.9□□□□□ -0.18
GABPB1-201ENST00000220429 SMU1Q2TAY7 513 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 TCHHL1Q5QJ38 904 aaPredicted RBP13.9□□□□□ -0.18
GABPB1-201ENST00000220429 ZNF618Q5T7W0 954 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 TRIM72Q6ZMU5 477 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 MAMSTRQ6ZN01 415 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 TMEM126BQ8IUX1 230 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 WDR49Q8IV35 697 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 MINDY2Q8NBR6 621 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 TRAPPC12Q8WVT3 735 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 MRRFQ96E11 262 aaKnown RBP13.9□□□□□ -0.18
GABPB1-201ENST00000220429 CDCA5Q96FF9 252 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 C7orf26Q96N11 449 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 AIFM2Q9BRQ8 373 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 HERPUD2Q9BSE4 406 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 MTMR12Q9C0I1 747 aa13.9□□□□□ -0.18
GABPB1-201ENST00000220429 SLC17A7Q9P2U7 560 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms