RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 GOLGA8QA0A0J9YX86 632 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 GOLGA8OA6NCC3 632 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.64■□□□□ 0.41
USB1-201ENST00000219281 GOLGA8NF8WBI6 632 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 H3BNX3 289 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 M0QYT0 321 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 EEF2KO00418 725 aaKnown RBP17.64■□□□□ 0.41
USB1-201ENST00000219281 AP1G2O75843 785 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 HOXD8P13378 290 aaPredicted RBP17.64■□□□□ 0.41
USB1-201ENST00000219281 VCLP18206 1134 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 AKAP5P24588 427 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 MTTPP55157 894 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 DLG1Q12959 904 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 GRIK4Q16099 956 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 LIN52Q52LA3 116 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 FBXO47Q5MNV8 452 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 ST13P4Q8IZP2 240 aaPredicted RBP17.64■□□□□ 0.41
USB1-201ENST00000219281 DNAAF3Q8N9W5 541 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 LENG8Q96PV6 779 aaPredicted RBP17.64■□□□□ 0.41
USB1-201ENST00000219281 RTKNQ9BST9 563 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 CCDC28BQ9BUN5 200 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 ACSS2Q9NR19 701 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 VANGL2Q9ULK5 521 aa17.64■□□□□ 0.41
USB1-201ENST00000219281 MMP3P08254 477 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 SERPINB5P36952 375 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 INHBEP58166 350 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 PAFAH1B3Q15102 231 aaKnown RBP17.63■□□□□ 0.41
USB1-201ENST00000219281 HSP90AA5PQ58FG0 334 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 SLC27A1Q6PCB7 646 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 CATSPER4Q7RTX7 472 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 PSTKQ8IV42 348 aaKnown RBP17.63■□□□□ 0.41
USB1-201ENST00000219281 ARHGAP18Q8N392 663 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 PPP1R36Q96LQ0 422 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 CENPKQ9BS16 269 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 SPATA16Q9BXB7 569 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 NXF3Q9H4D5 531 aaKnown RBP17.63■□□□□ 0.41
USB1-201ENST00000219281 CPSF2Q9P2I0 782 aaKnown RBP17.63■□□□□ 0.41
USB1-201ENST00000219281 KPNA7A9QM74 516 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 TMEM114B3SHH9 223 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 TRIM13O60858 407 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 DAB1O75553 588 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 LTFP02788 710 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 MPOP05164 745 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 PTPN3P26045 913 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 NDUFV1P49821 464 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 XIAPP98170 497 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 DPYSQ14117 519 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 MMEL1Q495T6 779 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 ANKRD20A4Q4UJ75 823 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 KBTBD6Q86V97 674 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 ZNF410Q86VK4 478 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 ACVR1CQ8NER5 493 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 URGCPQ8TCY9 931 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 PPP1R13LQ8WUF5 828 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 MFSD3Q96ES6 412 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 KCNK16Q96T55 309 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 ABHD16BQ9H3Z7 469 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 PRDM16Q9HAZ2 1276 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 BFARQ9NZS9 450 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 G3BP2Q9UN86 482 aaKnown RBP17.63■□□□□ 0.41
USB1-201ENST00000219281 SSX2IPQ9Y2D8 614 aa17.63■□□□□ 0.41
USB1-201ENST00000219281 ZCWPW2A0A1B0GU75 182 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 FAM72CH0Y354 149 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 TXNDC9O14530 226 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 AIM2O14862 343 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 DCLK1O15075 740 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 ATP9BO43861 1147 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 RECQL4O94761 1208 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 AP2A1O95782 977 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 C2P06681 752 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 FAM110CQ1W6H9 321 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 FAM72AQ5TYM5 149 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 SYPL2Q5VXT5 272 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 FAM72DQ6L9T8 149 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 PLEKHH3Q7Z736 793 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 CLEC14AQ86T13 490 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 TMEM135Q86UB9 458 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 FAM72BQ86X60 149 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 GATA5Q9BWX5 397 aaPredicted RBP17.62■□□□□ 0.41
USB1-201ENST00000219281 FAM49AQ9H0Q0 323 aaPredicted RBP17.62■□□□□ 0.41
USB1-201ENST00000219281 WDR55Q9H6Y2 383 aaPredicted RBP17.62■□□□□ 0.41
USB1-201ENST00000219281 CDHR5Q9HBB8 845 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 NMRAL1Q9HBL8 299 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 TCF7L2Q9NQB0 619 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 SETD4Q9NVD3 440 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 KLK14Q9P0G3 267 aa17.62■□□□□ 0.41
USB1-201ENST00000219281 CLDN5O00501 218 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 NEMP1O14524 444 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 XPO1O14980 1071 aaKnown RBP17.61■□□□□ 0.41
USB1-201ENST00000219281 BEST1O76090 585 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 GLDCP23378 1020 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 NOS2P35228 1153 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 FKBP1BP68106 108 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 GRAMD1BQ3KR37 738 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 PRAMEF19Q5SWL8 479 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 CERCAMQ5T4B2 595 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 SREK1Q8WXA9 508 aaKnown RBP17.61■□□□□ 0.41
USB1-201ENST00000219281 NPY6RQ99463 290 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 PIGVQ9NUD9 493 aa17.61■□□□□ 0.41
USB1-201ENST00000219281 PIRO00625 290 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms