RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 GPR15P49685 360 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 EIF2B5Q13144 721 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 EFTUD2Q15029 972 aaKnown RBP eCLIP9.12□□□□□ -0.952e-6■■■■■ 32
MTHFD1-201ENST00000216605 NFE2Q16621 373 aaPredicted RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 VARS2Q5ST30 1063 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM171BQ6P995 826 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC15A3Q8IY34 581 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 PPM1NQ8N819 430 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 RRN3Q9NYV6 651 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 HCSTQ9UBK5 93 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 FBXW11Q9UKB1 542 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 ADAM28Q9UKQ2 775 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 PCDHB5Q9Y5E4 795 aa9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 MYO18AQ92614 2054 aaKnown RBP9.12□□□□□ -0.95
MTHFD1-201ENST00000216605 DFFAO00273 331 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 KDM1AO60341 852 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PFDN1O60925 122 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 UNC5CO95185 931 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 METTL18O95568 372 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 CCNB1P14635 433 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 FOSL1P15407 271 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 GEMIN4P57678 1058 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 MXRA7P84157 204 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 KLHL38Q2WGJ6 581 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 VSIG1Q86XK7 387 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 MIB1Q86YT6 1006 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 COLGALT2Q8IYK4 626 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PDCD7Q8N8D1 485 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 DQX1Q8TE96 717 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 TGS1Q96RS0 853 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 KLF6Q99612 283 aaPredicted RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 C11orf84Q9BUA3 381 aaPredicted RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 TRIM62Q9BVG3 475 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PRKAG3Q9UGI9 489 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 ATP11BQ9Y2G3 1177 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 HTTP42858 3142 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 A8MUI8 341 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 CHADO15335 359 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 CA4P22748 312 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 CDC25CP30307 473 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 CYP2C18P33260 490 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PRMT2P55345 433 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PKN2Q16513 984 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PARP6Q2NL67 630 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 CD300LGQ6UXG3 332 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PSTKQ8IV42 348 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 TP53INP2Q8IXH6 220 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 DNAAF3Q8N9W5 541 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 P2RY11Q96G91 374 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 MAGEB18Q96M61 343 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM167BQ9BTA0 163 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 OSBPL1AQ9BXW6 950 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PITPNM3Q9BZ71 974 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 TRABDQ9H4I3 376 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 ABCC13Q9NSE7 274 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PCMTD2Q9NV79 361 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PSMC3IPQ9P2W1 217 aaPredicted RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 LRRC42Q9Y546 428 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 A0A1W2PQH9 124 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 TRIM64CA6NLI5 447 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 HHLA1C9JL84 531 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 MTRF1O75570 445 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 CCDC166P0CW27 439 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 CALB2P22676 271 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 HOXD12P35452 270 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 ALDH7A1P49419 539 aaKnown RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 NUMBP49757 651 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 RASSF2P50749 326 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 GPX6P59796 221 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 TAF12Q16514 161 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 RAB41Q5JT25 222 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 LRRC49Q8IUZ0 686 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 AGGF1Q8N302 714 aaeCLIP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 GABPB2Q8TAK5 448 aaPredicted RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PPP1R14BQ96C90 147 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 QKIQ96PU8 341 aaKnown RBP eCLIP9.11□□□□□ -0.951e-15■■■■□ 23.1
MTHFD1-201ENST00000216605 CYTH2Q99418 400 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PAFAH2Q99487 392 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 GPR62Q9BZJ7 368 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 CCDC68Q9H2F9 335 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 PPCSQ9HAB8 311 aa9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 RCOR3Q9P2K3 495 aaPredicted RBP9.11□□□□□ -0.95
MTHFD1-201ENST00000216605 ABHD2P08910 425 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 SERPINB6P35237 376 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 MRPS35P82673 323 aaKnown RBP9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 IL9RQ01113 521 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 EFEMP1Q12805 493 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 SPARCL1Q14515 664 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 PPP2R5DQ14738 602 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 OTUD1Q5VV17 481 aaPredicted RBP9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 TRIM68Q6AZZ1 485 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 C4orf22Q6V702 233 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 FAM126BQ8IXS8 530 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 SLC7A5P1Q8MH63 180 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 CHCHD4Q8N4Q1 142 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 PAF1Q8N7H5 531 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 IRGQQ8WZA9 623 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 FBXO32Q969P5 355 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 PPP2R3CQ969Q6 453 aa9.1□□□□□ -0.95
MTHFD1-201ENST00000216605 MPP4Q96JB8 637 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms