RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 ENOSF1Q7L5Y1 443 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 DEFB106AQ8N104 65 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 ALG14Q96F25 216 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 LRIG1Q96JA1 1093 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 CPXM1Q96SM3 734 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 CRACR2AQ9BSW2 395 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 COX16Q9P0S2 106 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 ARHGAP20Q9P2F6 1191 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 SLC12A6Q9UHW9 1150 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 SARDHQ9UL12 918 aa20.27■□□□□ 0.84
SYNGR1-201ENST00000216155 A0A087WV48 116 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3DA0A087WVF3 549 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3IA0A087WXS9 549 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3EA0A087X179 549 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3KA0A087X1G2 549 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3FA6NER0 549 aaPredicted RBP20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3LB9A6J9 549 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 E9PAM4 449 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 SLC7A4O43246 635 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 PLRG1O43660 514 aaKnown RBP20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 RTN2O75298 545 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3HP0C7X1 549 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 SLC2A3P11169 496 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 CCR1P32246 355 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 ARRB1P49407 418 aaPredicted RBP20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 VASPP50552 380 aaPredicted RBP20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 CDK17Q00537 523 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3GQ6DHY5 549 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3CQ6IPX1 549 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 SPATS2Q86XZ4 545 aaKnown RBP20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 PASD1Q8IV76 773 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 TBC1D3Q8IZP1 549 aaPredicted RBP20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 WDTC1Q8N5D0 677 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 EID2Q8N6I1 236 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 RPRD1AQ96P16 312 aaPredicted RBP20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 ASNSD1Q9NWL6 643 aa20.26■□□□□ 0.83
SYNGR1-201ENST00000216155 KNTC1P50748 2209 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 ATP9BO43861 1147 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 HSF2BPO75031 334 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 GRAP2O75791 330 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 GLI1P08151 1106 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 GGCXP38435 758 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 RXRGP48443 463 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 OXCT1P55809 520 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 APBA1Q02410 837 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 BNIP3Q12983 259 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 ARHGAP44Q17R89 818 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 SLC45A4Q5BKX6 768 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 AGBL4Q5VU57 503 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 SFMBT2Q5VUG0 894 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 KANSL1Q7Z3B3 1105 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 OXR1Q8N573 874 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 MFSD2AQ8NA29 543 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 OR8D1Q8WZ84 308 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 TSC1Q92574 1164 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 KDM4CQ9H3R0 1056 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 ERVMER34-1Q9H9K5 563 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 VANGL2Q9ULK5 521 aa20.25■□□□□ 0.83
SYNGR1-201ENST00000216155 DOCK9Q9BZ29 2069 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 SLC9A1P19634 815 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 MAT2AP31153 395 aaKnown RBP20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 USP8P40818 1118 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 AUHQ13825 339 aaKnown RBP20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 POM121L1PQ3SYA9 428 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 OLFML1Q6UWY5 402 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 FAM183BPQ6ZVS7 135 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 Q6ZVU0 165 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 DSG4Q86SJ6 1040 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 PRPF39Q86UA1 669 aaKnown RBP20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 TRIM69Q86WT6 500 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 RNF34Q969K3 372 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 NXPE2Q96DL1 559 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 CRELD1Q96HD1 420 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 PPP1R13BQ96KQ4 1090 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 BBC3Q96PG8 261 aaPredicted RBP20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 FEM1AQ9BSK4 669 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 APEX2Q9UBZ4 518 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 SLC25A13Q9UJS0 675 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 OR51B4Q9Y5P0 310 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 HS3ST4Q9Y661 456 aa20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 ARID1BQ8NFD5 2236 aaPredicted RBP20.24■□□□□ 0.83
SYNGR1-201ENST00000216155 C1SP09871 688 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 HNF1BP35680 557 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 CNTN1Q12860 1018 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 ACCSLQ4AC99 568 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 EFHC1Q5JVL4 640 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 HES3Q5TGS1 186 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 OTUD1Q5VV17 481 aaPredicted RBP20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 FAM46CQ5VWP2 391 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 IQCHQ86VS3 1027 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 C1orf131Q8NDD1 294 aaKnown RBP20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 PIP4K2CQ8TBX8 421 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 SHC3Q92529 594 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 FAM81BQ96LP2 452 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 PPM1HQ9ULR3 514 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 PCDHGC3Q9UN70 934 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 DMTF1Q9Y222 760 aa20.23■□□□□ 0.83
SYNGR1-201ENST00000216155 C1QTNF3-AMACRE9PGA6 284 aa20.22■□□□□ 0.83
SYNGR1-201ENST00000216155 ALOX15BO15296 676 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms