RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 SOX17Q9H6I2 414 aaPredicted RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 TLL2Q9Y6L7 1015 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 A0A087WZ62 844 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 ZNF839A8K0R7 811 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 MFSD11O43934 449 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 TNFAIP8O95379 198 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 GARSP41250 739 aaKnown RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CSE1LP55060 971 aaKnown RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 TBCCQ15814 346 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 FBXO48Q5FWF7 155 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 SEL1L3Q68CR1 1132 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 PPP1R2P3Q6NXS1 205 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 ARCQ7LC44 396 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 KBTBD6Q86V97 674 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 PDCD6IPQ8WUM4 868 aaKnown RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 PHF21BQ96EK2 531 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CAMKK2Q96RR4 588 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 FDXACB1Q9BRP7 624 aaPredicted RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CDH19Q9H159 772 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 DPEP3Q9H4B8 488 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 ARMC7Q9H6L4 198 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 EPS15L1Q9UBC2 864 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CDY2AQ9Y6F7 541 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CDY1Q9Y6F8 540 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 GPC4O75487 556 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 MTTPP55157 894 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CTBP1Q13363 440 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 SNAPC2Q13487 334 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 HABP4Q5JVS0 413 aaKnown RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 ITFG2Q969R8 447 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CELF6Q96J87 481 aaKnown RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 NMRAL1Q9HBL8 299 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CHST12Q9NRB3 414 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 EGFL7Q9UHF1 273 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 ZDHHC2Q9UIJ5 367 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 CPSF3Q9UKF6 684 aaKnown RBP17.09■□□□□ 0.33
CTDP1-201ENST00000075430 PCDHGC3Q9UN70 934 aa17.09■□□□□ 0.33
CTDP1-201ENST00000075430 PLOD2O00469 737 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 TRIM13O60858 407 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 POLBP06746 335 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 DPP6P42658 865 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 YAP1P46937 504 aaKnown RBP17.08■□□□□ 0.33
CTDP1-201ENST00000075430 CXCR3P49682 368 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 SH3D19Q5HYK7 790 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 OR9I1Q8NGQ6 314 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 CYGBQ8WWM9 190 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 SREK1Q8WXA9 508 aaKnown RBP17.08■□□□□ 0.33
CTDP1-201ENST00000075430 P2RY11Q96G91 374 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 FERMT1Q9BQL6 677 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 MRPL45Q9BRJ2 306 aaKnown RBP17.08■□□□□ 0.33
CTDP1-201ENST00000075430 KLK14Q9P0G3 267 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 ZNF180Q9UJW8 692 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 CNTN6Q9UQ52 1028 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 SH3BP1Q9Y3L3 701 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 SNX10Q9Y5X0 201 aa17.08■□□□□ 0.33
CTDP1-201ENST00000075430 RNF103-CHMP3A0A140T963 221 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 ARHGAP10A1A4S6 786 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 NRP1O14786 923 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 BIRC5O15392 142 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 MAFGO15525 162 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 ATG7O95352 703 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 THRAP10827 490 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 ME2P23368 584 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 NAA20P61599 178 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 PLIN5Q00G26 463 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 PABPC1LQ4VXU2 614 aaKnown RBP17.08■□□□□ 0.32
CTDP1-201ENST00000075430 FAM47BQ8NA70 645 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 SEPT1Q8WYJ6 367 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 CERS2Q96G23 380 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 TRPC7Q9HCX4 862 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 SPATA31C2B4DYI2 1134 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 GIPC1O14908 333 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 IQCF3P0C7M6 154 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 DCTN2Q13561 401 aaKnown RBP17.08■□□□□ 0.32
CTDP1-201ENST00000075430 AGKQ53H12 422 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 DUS1LQ6P1R4 473 aaKnown RBP17.08■□□□□ 0.32
CTDP1-201ENST00000075430 MPZL3Q6UWV2 235 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 OFCC1Q8IZS5 231 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 KLHL23Q8NBE8 558 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 NT5C1AQ9BXI3 368 aa17.08■□□□□ 0.32
CTDP1-201ENST00000075430 TFEBP19484 476 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 SEPT6Q14141 434 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 PGM2L1Q6PCE3 622 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 XKR5Q6UX68 686 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 CATSPERGQ6ZRH7 1159 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 CYP4V2Q6ZWL3 525 aaPredicted RBP17.07■□□□□ 0.32
CTDP1-201ENST00000075430 EMID1Q96A84 441 aaPredicted RBP17.07■□□□□ 0.32
CTDP1-201ENST00000075430 CSPG4P5Q96PW8 444 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 KCTD15Q96SI1 283 aaPredicted RBP17.07■□□□□ 0.32
CTDP1-201ENST00000075430 PCYT2Q99447 389 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 SLC29A1Q99808 456 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 C1orf21Q9H246 121 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 EFR3BQ9Y2G0 817 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 ADGRA2Q96PE1 1338 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 ADM5C9JUS6 153 aa17.07■□□□□ 0.32
CTDP1-201ENST00000075430 EEF1B2P24534 225 aaKnown RBP17.07■□□□□ 0.32
CTDP1-201ENST00000075430 GRK2P25098 689 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms