RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 NUP93Q8N1F7 819 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 SREK1Q8WXA9 508 aaKnown RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 CASP10Q92851 521 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 FCRL2Q96LA5 508 aaPredicted RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 TSGA13Q96PP4 275 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 RBBP8Q99708 897 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 GORASP1Q9BQQ3 440 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 TSEN34Q9BSV6 310 aaKnown RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 MLPHQ9BV36 600 aaPredicted RBP8.44□□□□□ -1.06
VAMP3-201ENST00000054666 WWP1Q9H0M0 922 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 NOD2Q9HC29 1040 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 TBC1D13Q9NVG8 400 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 NSMCE4AQ9NXX6 385 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 KCNK4Q9NYG8 393 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 DONSONQ9NYP3 566 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 HEY2Q9UBP5 337 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 HAO1Q9UJM8 370 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 PCDHB5Q9Y5E4 795 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 PSAT1Q9Y617 370 aa8.44□□□□□ -1.06
VAMP3-201ENST00000054666 CENPFP49454 3210 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 E9PAM4 449 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 TIMM44O43615 452 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 DDHD2O94830 711 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 OAZ2O95190 189 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 DLDP09622 509 aaKnown RBP8.43□□□□□ -1.06
VAMP3-201ENST00000054666 MYL2P10916 166 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 LIMK2P53671 638 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 GEMP55040 296 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 CSE1LP55060 971 aaKnown RBP8.43□□□□□ -1.06
VAMP3-201ENST00000054666 IRX4P78413 519 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 STX3Q13277 289 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 MPP3Q13368 585 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 PDE1CQ14123 709 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-201ENST00000054666 INSCQ1MX18 579 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 ANKRD20A4Q4UJ75 823 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 PLEKHG4Q58EX7 1191 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 STRA8Q7Z7C7 330 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 MON1AQ86VX9 555 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 LRRC49Q8IUZ0 686 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 ARID3BQ8IVW6 561 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-201ENST00000054666 REM2Q8IYK8 340 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-201ENST00000054666 MAGEC3Q8TD91 643 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 TMEM237Q96Q45 408 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 TBL1YQ9BQ87 522 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 APOL2Q9BQE5 337 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 FSD1LQ9BXM9 530 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 TRPV6Q9H1D0 765 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 C20orf96Q9NUD7 363 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-201ENST00000054666 TMEM161AQ9NX61 479 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 IL1RAPL1Q9NZN1 696 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 FNIP2Q9P278 1114 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 SOX13Q9UN79 622 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 MAGED2Q9UNF1 606 aaPredicted RBP8.43□□□□□ -1.06
VAMP3-201ENST00000054666 TRIM33Q9UPN9 1127 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 NEU3Q9UQ49 428 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 SCML2Q9UQR0 700 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 NUP205Q92621 2012 aa8.43□□□□□ -1.06
VAMP3-201ENST00000054666 A0A1W2PQ45 241 aaPredicted RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 A0A1W2PQY0 241 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 DNAJC6O75061 913 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CBX6O95503 412 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 ATP5BP06576 529 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 COL6A1P12109 1028 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 SERPINB3P29508 390 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 TUBP50607 506 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 OCRLQ01968 901 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 NRG1Q02297 640 aaPredicted RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CDK18Q07002 472 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 EIF4EBP2Q13542 120 aaPredicted RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CTXN3Q4LDR2 81 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 FASTKD1Q53R41 847 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 VARS2Q5ST30 1063 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CERCAMQ5T4B2 595 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 MANEALQ5VSG8 457 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 ICE2Q659A1 982 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 PDPK2PQ6A1A2 396 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 MSANTD2Q6P1R3 559 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 LRRC8DQ7L1W4 858 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 SCD5Q86SK9 330 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CEP57Q86XR8 500 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 ARHGAP12Q8IWW6 846 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 RTL3Q8N8U3 475 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 PPHLN1Q8NEY8 458 aaKnown RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 IPMKQ8NFU5 416 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 CD99L2Q8TCZ2 262 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 PPP4R1Q8TF05 950 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 LINC01599Q8WXQ3 324 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 SKA1Q96BD8 255 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 ATXN7L3BQ96GX2 97 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 C8orf48Q96LL4 319 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 TSNARE1Q96NA8 513 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 FCRL3Q96P31 734 aaPredicted RBP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 FCRL5Q96RD9 977 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 SIKE1Q9BRV8 207 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.42□□□□□ -1.06
VAMP3-201ENST00000054666 SNX15Q9NRS6 342 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 THAP1Q9NVV9 213 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 UBP1Q9NZI7 540 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 MID2Q9UJV3 735 aa8.42□□□□□ -1.06
VAMP3-201ENST00000054666 TLR6Q9Y2C9 796 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms